DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnb and Prpf4b

DIOPT Version :9

Sequence 1:NP_728107.2 Gene:mnb / 32771 FlyBaseID:FBgn0259168 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_001011923.1 Gene:Prpf4b / 291078 RGDID:1307784 Length:1007 Species:Rattus norvegicus


Alignment Length:474 Identity:144/474 - (30%)
Similarity:226/474 - (47%) Gaps:68/474 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 AEDLPATHRDVMHHHSSPSSSSEVRAMQARIPNHFREPASGPLRKLSVDLIKTY------KHINE 252
            |||   ::..|....|||.||:..|:..   |:...|..:..:::...:.:.|:      || |.
  Rat   556 AED---SNISVPSEPSSPQSSTRSRSPS---PDDILERVAADVKEYERENVDTFEASVKAKH-NL 613

  Fly   253 VYYAKKKRRAQQ--------TQGDD------DSS---------NKKERKLYNDGYDDDNHDYIIK 294
            :...:....:|:        |:.||      ||:         :.||.....|.:.|....|.:.
  Rat   614 MTVEQNNGSSQKKLLAPDMFTESDDMFAAYFDSARLRAAGIGKDFKENPNLRDNWTDAEGYYRVN 678

  Fly   295 NGEKFLDRYEIDSLIGKGSFGQVVKAYDH-EEQCHVAIKIIKNKKPFLNQAQIEVKLLEMMNRAD 358
            .||....||.:....|:|.|..||:|.|: .....||:|||:|.:........|::.|:.:|.||
  Rat   679 IGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDAD 743

  Fly   359 AENKYYIVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFR-GVSLNLTRKFAQQLCTALLFLST 422
            .::|::.::|.|||..:.|||||||.||.||.::|:..... |:.:...|.::|||..||..|. 
  Rat   744 PDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLK- 807

  Fly   423 PELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR-IYHYIQSRFYRSPEVLLGIQYDLAI 486
             ..||:|.|:||:|||: |..::.:|:.||||:..:... |..|:.|||||:||:::|..||..|
  Rat   808 -RCNILHADIKPDNILV-NESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGI 870

  Fly   487 DMWSLGCILVEMHTGEPLFSGCNEVDQMNKIVEVLG-MPPKYLLDQAHKTRKF----------FD 540
            ||||:||.|.|::||:.||.|......:...:::.| ||.|.:.....|.:.|          .|
  Rat   871 DMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFMYIEVD 935

  Fly   541 KIVADGSYVLKKNQNGRKYKPPGSRKLHDILGVETGGPGGRRLDEPGHSVSDYLKFKDLILRMLD 605
            |:.......:....|      |....|.|::|.:       ||.|........|  |||:.::|.
  Rat   936 KVTEREKVTVMSTIN------PTKDLLADLIGCQ-------RLPEDQRKKVHQL--KDLLDQILM 985

  Fly   606 FDPKTRVTPYYALQHNFFK 624
            .||..|::...||||.|.:
  Rat   986 LDPAKRISINQALQHAFIQ 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mnbNP_728107.2 PKc_DYRK1 289..628 CDD:271128 118/350 (34%)
S_TKc 303..623 CDD:214567 113/333 (34%)
Prpf4bNP_001011923.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..104
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 141..535
PTZ00108 <171..396 CDD:240271
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 560..583 8/25 (32%)
STKc_PRP4 686..1003 CDD:271037 114/334 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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