DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnb and prpf-4

DIOPT Version :9

Sequence 1:NP_728107.2 Gene:mnb / 32771 FlyBaseID:FBgn0259168 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_001250391.1 Gene:prpf-4 / 172443 WormBaseID:WBGene00004186 Length:775 Species:Caenorhabditis elegans


Alignment Length:603 Identity:168/603 - (27%)
Similarity:247/603 - (40%) Gaps:122/603 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 NQDQADDDDAGH---------QIISKF-------------LPKSAWDTVLLDVKRDVDEDGDRDR 129
            |.|...||:...         |||.|.             .|:|  ||: .|.|.|..||...|.
 Worm   224 NLDSDSDDEQKKIEAARKRRIQIIKKIEGHTEENTPRDSSTPRS--DTI-GDKKTDESEDSSSDS 285

  Fly   130 DRVDGNVLMVQGSSSSSSRMKAERALYYTMSAYGSSGGSVDAAQGSGSGGGRQRHAPLYGRFVDA 194
            :            .....|..||.......:.:||.       ||||:.      .|:  .....
 Worm   286 E------------DDEDDRKLAEAKDLIKSTRFGSE-------QGSGAS------TPV--SIQSD 323

  Fly   195 EDLPATH----RDVMHHHSSPSSSSEVRAMQARIPNHFREPASGPL------------RKLSVDL 243
            .|.|...    ||.|.|.......:....:|......:||.....|            :||..:.
 Worm   324 NDTPTDFFSGLRDKMVHMKDADEHNVDEVLQRGKDEEYREDWHTQLKEQEKREEEEKKKKLEAEA 388

  Fly   244 IKTYKHINEVYYAKKKRRAQQTQGDDDSSNKKE---------------RKLYNDGYDDDNHDYII 293
                    ....||||::.:...|.|..::.:|               .....|.:||....|.:
 Worm   389 --------AAEAAKKKKQEEDDTGFDMFADNEELPQDSTTIDGHSGAVHDTLKDNWDDVEGYYRV 445

  Fly   294 KNGEKFLDRYEIDSLIGKGSFGQVVKAYDHEEQCHVAIKIIKNKKPFLNQAQIEVKLLEMMNRAD 358
            :.||....||.:....|.|.||.|.:..|..:...||:|||:|.:........|:::|..:|.||
 Worm   446 RIGELLDTRYRVVGFTGAGVFGNVCRCNDQTKGNTVAVKIIRNNEVMYKTGLRELEVLRKLNEAD 510

  Fly   359 AENKYYIVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFR-GVSLNLTRKFAQQLCTALLFLST 422
            .|:||:.::|.|.|...||||||||.||.||.:||:....: |:.|...|.:||||..||..|. 
 Worm   511 KEDKYHCLRLFRTFKHHNHLCLVFENLSMNLRELLKKYGQKDGLHLKAVRSYAQQLLLALRLLK- 574

  Fly   423 PELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG-QRIYHYIQSRFYRSPEVLLGIQYDLAI 486
             :|..:|.|:||:|||: |..:..:|:.||||:.::. |.:..|:.|||||:||::||:::|.||
 Worm   575 -KLEFVHADIKPDNILV-NESKLTLKLCDFGSAGRVNEQELAPYLVSRFYRAPEIMLGVRHDYAI 637

  Fly   487 DMWSLGCILVEMHTGEPLFSGCNEVDQMNKIVEVLGMPPKYLLDQAHKTRKFF-----------D 540
            |:||:...|.|::||:.:|.|......:....:|.|..|..|:.::......|           |
 Worm   638 DLWSVAVTLYEVYTGKIMFPGRTNNHMLKLFTDVKGKYPNKLVRKSQFKDTHFDVNCNLLYQEVD 702

  Fly   541 KIVADGSYVLKKNQNGRKYKPPGSRKLHDILGVETGGPGGRRLDEPGHSVSDYLKFKDLILRMLD 605
            |:.......:..|     .||  :|.|...|      ..|:||..  ..:.....|:.|:..||.
 Worm   703 KVTERNKITVLAN-----LKP--TRDLESEL------IAGQRLSR--DQMDQIQAFRTLLDGMLI 752

  Fly   606 FDPKTRVTPYYALQHNFF 623
            .||..|.|...||:|.||
 Worm   753 LDPSKRTTCNEALKHPFF 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mnbNP_728107.2 PKc_DYRK1 289..628 CDD:271128 118/348 (34%)
S_TKc 303..623 CDD:214567 112/332 (34%)
prpf-4NP_001250391.1 STKc_PRP4 454..770 CDD:271037 113/333 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D870358at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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