DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and ARP1

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_011997.1 Gene:ARP1 / 856530 SGDID:S000001171 Length:384 Species:Saccharomyces cerevisiae


Alignment Length:434 Identity:78/434 - (17%)
Similarity:148/434 - (34%) Gaps:140/434 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 IHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCAVLVVNDVYVRRHLR 241
            :.:||:.|.:.           ....:|.||||.|.|.|:  |:.:|.|..::....:...::..
Yeast    74 LRYPIKHGVVE-----------DWDSMELIWSYVLNEVLQ--LQNIGEHPLLITEAPMNPLKNRE 125

  Fly   242 EFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGG 306
            :...:|.........::...:|.|.:.:|...|||||.|....|...|.||.:...:.:|:..||
Yeast   126 QMAQVLFETFDVSALYVSNPAVLSLYASGRTTGCVVDCGEGYCSTVPIYDGFALPASMMRMDIGG 190

  Fly   307 GDLDQVLLLLLRK-CGFPYRECNVQESYVDAHLLDELKEKFCHLNASVCGAQEKHF--------N 362
            .|:.:.|...||| .|......:.:|      ::..:|||.|:|..::...:||:.        .
Yeast   191 ADITEQLQFQLRKSAGVSLFSSSERE------IVRTMKEKVCYLAKNIKKEEEKYLQGTQDLIST 249

  Fly   363 LRKHNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKET 427
            .:..:|:    .|:||::...||..||..:::.:                               
Yeast   250 FKLPDGR----CIEVGNDRYRAPEILFSPQIIGL------------------------------- 279

  Fly   428 GRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGC 492
                              ||.                                            
Yeast   280 ------------------GYD-------------------------------------------- 282

  Fly   493 YHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLA---AWLEQRISQQVQSE 554
                     .|....:|||.:: ..:.::.:..||:|.|.:..|.|..   .|..:.:::.. |:
Yeast   283 ---------GLSDMCMQSIWKV-DLDLRKPLLSSIILSGGTTTLKGFGDRMLWDLEALTKGT-SK 336

  Fly   555 VNVLIKGMDAGMVAWKGAAIMSVLESARELWISQNDWQRHGLRV 598
            :.: |...:.....|.|.:|::.|.:.:.||..::||.....||
Yeast   337 IKI-IAPSERKYTTWIGGSILTGLSTFQRLWTKKSDWLEDSTRV 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 75/409 (18%)
ARP1NP_011997.1 ACTIN 12..384 CDD:214592 78/434 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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