DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and ARP9

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_013747.1 Gene:ARP9 / 855049 SGDID:S000004636 Length:467 Species:Saccharomyces cerevisiae


Alignment Length:374 Identity:66/374 - (17%)
Similarity:129/374 - (34%) Gaps:111/374 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 PIQRGELNVHNEKGGSLQASMQHLERIWSYALEERL------------KIPLRKLGTHCAVLVVN 232
            |||.||:.       .:.|..|.|..|:...|.:|.            .|||        :|:.:
Yeast    67 PIQNGEII-------DISAFTQFLRLIFVSILSDRANKNQDAFEAELSNIPL--------LLITH 116

  Fly   233 DVYVRRHLREFVTLLLRRLGFRRCFLVQDSVASTFG-AGIGYGCVVDIGAQKTSIACIEDGISQL 296
            ..:.:..|......:...|.......:..|:|:|:. ..:...|::|:|...|.|..|.| .:||
Yeast   117 HSWSQSDLEIITQYVFESLEINNLIQLPASLAATYSMISLQNCCIIDVGTHHTDIIPIVD-YAQL 180

  Fly   297 DARV-RLSYGGGDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHLNASVCGAQEKH 360
            |..| .:..||..::..|..||     |..:.:..||...:.:.:.|.:....|::         
Yeast   181 DHLVSSIPMGGQSINDSLKKLL-----PQWDDDQIESLKKSPIFEVLSDDAKKLSS--------- 231

  Fly   361 FNLRKHNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLK 425
            |:....|......|:.|.:              :..:||.    |::.:::             :
Yeast   232 FDFGNENEDEDEGTLNVAE--------------IITSGRD----TREVLEE-------------R 265

  Fly   426 ETGRK-NGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNS 489
            |.|:| ..|:..| |:.:|..             ||:                 |.:...|:...
Yeast   266 ERGQKVKNVKNSD-LEFNTFW-------------DEK-----------------GNEIKVGKQRF 299

  Fly   490 NGCYHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPG 538
            .||    ..|:..:...:..:::.:......:.::.:|::||.:..:.|
Yeast   300 QGC----NNLIKNISNRVGLTLDNIDDINKAKAVWENIIIVGGTTSISG 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 59/352 (17%)
ARP9NP_013747.1 COG5277 1..467 CDD:227602 66/374 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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