DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and ARP8

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_014784.1 Gene:ARP8 / 854309 SGDID:S000005667 Length:881 Species:Saccharomyces cerevisiae


Alignment Length:728 Identity:169/728 - (23%)
Similarity:291/728 - (39%) Gaps:200/728 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SRASSTSSGRHPAPPPIGLPQ-PQAQPLEAP-----------KIIVIHPGSQHLRIGRAADLNPL 56
            |:.|||::     |..|.|.. |.::...||           ..|||||||..::||...|.:|:
Yeast   230 SQISSTNT-----PDVIDLKSLPHSEASAAPLNDEIDLNDPTATIVIHPGSNSIKIGFPKDDHPV 289

  Fly    57 TLLHAVAYRRRPGASDRPHHDPLLPPLDNV-----------NSNSGLMVEFEEQRLVVSRILQHC 110
            .:.:.||..::....:...|      ::||           |..|.:...|.|:    .|..:..
Yeast   290 VVPNCVAVPKKWLDLENSEH------VENVCLQREQSEEFNNIKSEMEKNFRER----MRYYKRK 344

  Fly   111 VVDNKNRLRVATPPQQLAHFNRSSQAEKV-----PAPSGQMADEPWLDREAPVLFDDRILRLGAV 170
            |..|.:        :|:..||.:|:.|.:     |:|.      .|       :|||..|..|:.
Yeast   345 VPGNAH--------EQVVSFNENSKPEIISEKNDPSPI------EW-------IFDDSKLYYGSD 388

  Fly   171 DARNYDIHF----PIQRGELNVHNEKGGSLQASMQHLERIWSYAL-EERLKIPLRKLGTHCAVLV 230
            ..|..|..|    |.:.|..||.:....||...:..:.::..:|| .|.|.:...|...:..|||
Yeast   389 ALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLV 453

  Fly   231 VNDVYVRRHLREFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYG-CVVDIGAQKTSIACIEDGIS 294
            :.|::.:.|:..|:.:||..|.|:...::|:|:|:.:||||... |||:|||.:|.|||:::|..
Yeast   454 IPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTV 518

  Fly   295 QLDARVRLSYGGGDLDQVLLLLLRKCGFPYRECNVQESYVDAH---LLDELKEKFCHLNASVCGA 356
            ...:.:.|.|||.|:.::..|.|.:..||.::..:...    |   |.:.||:.|.....:....
Yeast   519 LEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSK----HGWLLAERLKKNFTTFQDADVAV 579

  Fly   357 QEKHFNLRKHNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCF-- 419
            |..:|..|..|....:|..::.||.::||||||..::..:. ||.:...........:..|.|  
Yeast   580 QLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLI-RTSSHKNSSLEFQLPESRDLFTN 643

  Fly   420 ---DAEYLKETGRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELI--VVDQDETISNCQSQLG 479
               |...|.:...|.|....|:                  .||.:::  ::|....|...|.:  
Yeast   644 ELNDWNSLSQFESKEGNLYCDL------------------NDDLKILNRILDAHNIIDQLQDK-- 688

  Fly   480 AQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSI---------NRLSSYETKRKMFGSILLVGSSAK 535
            .:..|..:..|         ..||::||:|||         .|::|:      :.:||:||.|:|
Yeast   689 PENYGNTLKEN---------FAPLEKAIVQSIANASITADVTRMNSF------YSNILIVGGSSK 738

  Fly   536 LPGLAAWLEQRIS------------------------------------------QQVQSEVNVL 558
            :|.|...|..||:                                          |.:|:::...
Yeast   739 IPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEK 803

  Fly   559 I-----------------------------KGMDAGMVAWKGAAIMSVLESARELWISQNDWQRH 594
            |                             :.|:..::.||||::::.::...||:|:.:||..|
Yeast   804 IVEELEEQHQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVH 868

  Fly   595 GLRVLRERSPFLW 607
            |.|:|:.:..|.:
Yeast   869 GSRILQYKCIFTY 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 113/492 (23%)
ARP8NP_014784.1 NBD_sugar-kinase_HSP70_actin 42..>447 CDD:418402 60/252 (24%)
ACTIN 266..878 CDD:214592 158/682 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341722
Domainoid 1 1.000 104 1.000 Domainoid score I1486
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11286
Inparanoid 1 1.050 182 1.000 Inparanoid score I947
Isobase 1 0.950 - 0 Normalized mean entropy S3387
OMA 1 1.010 - - QHG52058
OrthoFinder 1 1.000 - - FOG0005819
OrthoInspector 1 1.000 - - oto100243
orthoMCL 1 0.900 - - OOG6_104893
Panther 1 1.100 - - LDO PTHR11937
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R86
SonicParanoid 1 1.000 - - X4212
TreeFam 1 0.960 - -
1615.740

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