DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and ARP3

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_012599.3 Gene:ARP3 / 853528 SGDID:S000003826 Length:449 Species:Saccharomyces cerevisiae


Alignment Length:478 Identity:73/478 - (15%)
Similarity:149/478 - (31%) Gaps:172/478 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 LGAVDARNYDIHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCAVLVV 231
            |.|....:|.:.:||:.|::.           :..|:||.|..::.:.|:   .:...|..:|..
Yeast   102 LVASQGPSYSLSYPIRHGQVE-----------NWDHMERFWENSIFKYLR---TEPEDHFFLLTE 152

  Fly   232 NDVYVRRHLREFVTLLLRRLGFRRCFLVQDSVASTFGAGIG--------YGCVVDIGAQKTSIAC 288
            ..:....:..:...:..........::...:|.:...:...        .|.|:|.|...|.:..
Yeast   153 PPLNPPENREQVAEIFFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVIDSGDGVTHVIP 217

  Fly   289 IEDGISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHLNASV 353
            :.:|.....|...:...|.|:...:..|||:.|         |:.......:::|:::|:    |
Yeast   218 VAEGYVIGSAIKNIPIAGRDITLFIQSLLRERG---------EADTSLRTAEKIKQEYCY----V 269

  Fly   354 CGAQEKHFN------------LRKHNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQ 406
            |....|.||            :.::..:..|..:.:|.|..:||...|:.|              
Yeast   270 CPDIVKEFNKFDKDPSKFAQFVVENQEKTRRKVVDIGYERFLAPEIFFNPE-------------- 320

  Fly   407 QAVQDQYDCEDCFDAEYLKETGRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETI 471
                                      :...|.|        .|.|           .||||  ||
Yeast   321 --------------------------IASSDFL--------TPLP-----------TVVDQ--TI 338

  Fly   472 SNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKL 536
            ..|                           |:|              .::.::.:|:|.|.|...
Yeast   339 QAC---------------------------PID--------------VRKGLYNNIVLSGGSTMF 362

  Fly   537 PGLAAWLEQRISQQVQSEVNVLI-----------KGMDAGMVA--------WKGAAIMSVLESAR 582
            ....    :|:.:.::|.||..|           .|:|..:::        |.|.::::.....:
Yeast   363 KDFG----RRLQRDLKSIVNNRIAQSELLSGTKSTGVDVSVISHRKQRNAVWFGGSLLAQTAEFK 423

  Fly   583 ELWISQNDWQRHGLRVLRERSPF 605
            ....::.|::.:|..::|..|.|
Yeast   424 GYCHTKKDYEEYGPEIVRNFSLF 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 65/439 (15%)
ARP3NP_012599.3 COG5277 1..445 CDD:227602 71/475 (15%)
PTZ00280 5..446 CDD:240343 72/476 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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