DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and ARP4

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_012454.1 Gene:ARP4 / 853364 SGDID:S000003617 Length:489 Species:Saccharomyces cerevisiae


Alignment Length:464 Identity:85/464 - (18%)
Similarity:171/464 - (36%) Gaps:134/464 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 WSYALEERLKIPLRKLGTHCAVLVVNDVY-VRRHLREFVTLLLRRLGFRRCFLVQDSVASTFGAG 270
            |.:||:..|.:   ...:....|:...|: ...:.::.:.:||..:.|..|:|...|...:|.||
Yeast    90 WQWALQNELYL---NSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAG 151

  Fly   271 IGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGG--------------DLDQVLLLLLRKCG 321
            .....|||||....|::.|.||:: |....|.::..|              ::..:..:..||..
Yeast   152 RPNCLVVDIGHDTCSVSPIVDGMT-LSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPE 215

  Fly   322 FPYRECNVQESY---VDAHLLD---------ELKEKFCHLNASVCGAQEKHFNLRKHNGQWLRYT 374
            |      :::::   ||..|.|         |.||..||    :|                    
Yeast   216 F------IKKTFDYEVDKSLYDYANNRGFFQECKETLCH----IC-------------------- 250

  Fly   375 IQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFD-------AEYL---KETG- 428
                           .|:.|..|....:...:::::..::.|..||       ||.|   ||.. 
Yeast   251 ---------------PTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDI 300

  Fly   429 RKNGVRGGDILQLSTSAGYQP----RPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNS 489
            ..|..|....:..:....|.|    :|. .|...|:::...::.|..:..:|...|..:....|.
Yeast   301 PANWPRSNSGVVKTWRNDYVPLKRTKPS-GVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNE 364

  Fly   490 NGCYHNGQGLVLPLDQA--------------IIQSINRLSSYETKRKMFGSILLVGSSAKLPGLA 540
            .|        ..||::.              ::.|....|..:.:..:..:::|.|.::.:||| 
Yeast   365 TG--------KRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGL- 420

  Fly   541 AWLEQRISQQVQSEVNVLIKGMDAGMV-----------AWKGAAIMSVLESARELWISQNDWQRH 594
                   |.::.:|:|.::..:...::           :|.|.:|::.|.:..:||:.:.:::..
Yeast   421 -------SDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEV 478

  Fly   595 GL-RVLRER 602
            |: |:|.:|
Yeast   479 GVERLLNDR 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 85/464 (18%)
ARP4NP_012454.1 COG5277 9..488 CDD:227602 85/464 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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