DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and ARP4A

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001323058.1 Gene:ARP4A / 843728 AraportID:AT1G73910 Length:167 Species:Arabidopsis thaliana


Alignment Length:186 Identity:38/186 - (20%)
Similarity:64/186 - (34%) Gaps:53/186 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 VTLLLRRLGFRRC---FLVQDSVASTF----GAGIGYGCVVDIGAQKTSIACIEDG-ISQLDARV 300
            |:.::..||...|   :..:|:..:.|    ||..|.|..:|..|..|     ||. .|..:...
plant     7 VSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTT-----EDAKESDKEKGK 66

  Fly   301 RLSYGGGDL-----DQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHLNASVCGAQEK- 359
            |..|.|...     ||:.:|...|.|.          ..|..::|.:.:.....::.:..|:.| 
plant    67 RKLYTGSQALNFRRDQMEILSPTKDGI----------VTDWDMVDNVWDHAFRASSELTAAERKV 121

  Fly   360 --HFNLRKHNGQWLRYTIQVGDEALMAPLALFHTELLNIT---------GRTKAVF 404
              .:.|...:..|:|.             .||...::|..         ||:|.|:
plant   122 WFLYLLSMLSSSWIRN-------------RLFWWNIINAVIERTPRERLGRSKVVY 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 38/186 (20%)
ARP4ANP_001323058.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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