DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and Actl6b

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_006504698.1 Gene:Actl6b / 83766 MGIID:1933548 Length:434 Species:Mus musculus


Alignment Length:413 Identity:78/413 - (18%)
Similarity:136/413 - (32%) Gaps:131/413 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 VLVVNDVYVRRHLREFVT-LLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIED 291
            ||:....:..|..||.:| |:..:......||.:.:|.:.|..|...|.|:|.||..|:...:.|
Mouse   117 VLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHD 181

  Fly   292 GISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYRECN--VQESYVD---AHLL---DELKEKFCH 348
            |.......|:....|              .|...:|.  .||..:|   .:::   :.::|    
Mouse   182 GYVLQQGIVKSPLAG--------------DFISMQCRELFQEMAIDIIPPYMIAAKEPVRE---- 228

  Fly   349 LNASVCGAQ---EKHFNLRKHNGQWLRY------------TIQVG----DEALMAPLALFHTELL 394
                  ||.   :|...|.:.:..|..|            .:||.    ||.:.|.:...|.|:.
Mouse   229 ------GAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMP 287

  Fly   395 NITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRGGDIL----QLSTSAGYQPRPQLPV 455
            |            .....|..|.....|.|.:.....|:.|..:|    .::||.|.......||
Mouse   288 N------------GYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPV 340

  Fly   456 TADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSINRLSSYETK 520
            .|              |.|                     .|||                     
Mouse   341 DA--------------SPC---------------------SQGL--------------------- 349

  Fly   521 RKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNVLI----KGMDAGMVAWKGAAIMSVLESA 581
               :||:::.|.:..|.|....|.:.:||:....:.:.:    ..|:.....|.|.:|::.|.:.
Mouse   350 ---YGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTF 411

  Fly   582 RELWISQNDWQRHGLRVLRERSP 604
            :::|||:.:::..|.:.:..:.|
Mouse   412 QQMWISKQEYEEGGKQCVERKCP 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 77/410 (19%)
Actl6bXP_006504698.1 Actin 11..434 CDD:306521 77/411 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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