DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and ARP6

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_566861.1 Gene:ARP6 / 823150 AraportID:AT3G33520 Length:421 Species:Arabidopsis thaliana


Alignment Length:494 Identity:96/494 - (19%)
Similarity:166/494 - (33%) Gaps:150/494 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 PAPSGQMADEPWLDREAPVLFDDRILRLGAVDARNYDIHFPIQRGEL---NVHNEKGGSLQASMQ 201
            |:|...::||                    :|..:..:..||.||.|   ::..|....|..|:.
plant    44 PSPLTTLSDE--------------------IDLTSAAVRRPIDRGYLINSDLQREIWSHLFTSLL 88

  Fly   202 HLERIWSYAL--EERLKIPLRKLGTHCAVLVVNDVYVRRHLREFVTLLLRRLGFRRCFLVQ---- 260
            |:....|..|  |..|.||                .|:|...|   |:....||...::..    
plant    89 HIAPSSSSLLLTEAPLSIP----------------SVQRTTDE---LVFEDFGFSSLYIAHPQSL 134

  Fly   261 ----------DSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQVLLL 315
                      ||:.|.....:    |||.|...|....:....:...|..|:..||......|..
plant   135 VHLYEASRQPDSILSKTQCSL----VVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKE 195

  Fly   316 LLRKCGFPYRECNVQESYVDAHLLDELKEKFCHLNASVCGAQEKHFNLRKHNGQWLRYTIQVGDE 380
            |:     .||..||.:   :..|:|:.|||.|.::..:.    :...|.::....::.|      
plant   196 LV-----SYRSINVMD---ETFLVDDAKEKLCFVSLDLL----RDLRLARNGNTLIKST------ 242

  Fly   381 ALMAPLALFHTE-----------LLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVR 434
             .:.|..:.||:           .|:::.:...|     |.|:.       .|..|....||   
plant   243 -YVLPDGVTHTKGYVKDPQAAKRFLSLSEKESVV-----VMDKV-------GERKKADMNKN--- 291

  Fly   435 GGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGL 499
                             ::.:|  :|..:|   .||:.. .:.||...||               
plant   292 -----------------EIDLT--NERFLV---PETLFQ-PADLGMNQAG--------------- 318

  Fly   500 VLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNVLIKGM-D 563
               |.:.|:::||...|| .:..::.||:|.|.|...|.|...||..:...|....:|.|... |
plant   319 ---LAECIVRAINSCHSY-LQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQED 379

  Fly   564 AGMVAWKGAAIMSVLESARELWISQNDWQRHGLRVLRER 602
            ..:..|:|.::::.......:.:::.:::..|....|.|
plant   380 PILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRR 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 83/429 (19%)
ARP6NP_566861.1 ACTIN 3..420 CDD:214592 96/494 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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