DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and Actr3

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001192314.1 Gene:Actr3 / 74117 MGIID:1921367 Length:418 Species:Mus musculus


Alignment Length:550 Identity:101/550 - (18%)
Similarity:172/550 - (31%) Gaps:191/550 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 LQHCVVD---NKNRLRVA--TPPQQLAHFNRSSQAEKVPAPSGQMADEPWLDREAPVLFDDRILR 166
            |..||||   ...:|..|  |.||.:.   .|..|.|..|..|..|     .|......||....
Mouse     5 LPACVVDCGTGYTKLGYAGNTEPQFII---PSCIAIKESAKVGDQA-----QRRVMKGVDDLDFF 61

  Fly   167 LG--AVDARNYDIHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCAVL 229
            :|  |::...|...:||:.|.:    |....::..|:.:  |:.|...|.        ..|..:|
Mouse    62 IGDEAIEKPTYATKWPIRHGIV----EDWDLMERFMEQV--IFKYLRAEP--------EDHYFLL 112

  Fly   230 V---VNDVYVRRHLREFVTLLLRRLGFRRCFLVQDSV----ASTFGAGIG----YGCVVDIGAQK 283
            .   :|....|.:..|   ::.........::...:|    ||.....:|    .|.|:|.|...
Mouse   113 TEPPLNTPENREYTAE---IMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGV 174

  Fly   284 TSIACIEDGISQLDARVRLSYGGGDLDQVLLLLL--RKCGFPYRECNVQESYVDAHLLDELKEKF 346
            |.:..:.:|.........:...|.|:...:..||  |:.|.|     .::|...|   ..:||::
Mouse   175 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIP-----PEQSLETA---KAVKERY 231

  Fly   347 CHLNASVCGAQEKHFNLRKHNG-QWLR------------YTIQVGDEALMAPLALFHTELLNITG 398
            .:    ||....|.||....:| :|::            ::|.||.|..:.|...||.|..|   
Mouse   232 SY----VCPDLVKEFNKYDTDGSKWIKQYTGVNAISKKEFSIDVGYERFLGPEIFFHPEFAN--- 289

  Fly   399 RTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELI 463
               ..|||                                               |::    |::
Mouse   290 ---PDFTQ-----------------------------------------------PIS----EVV 300

  Fly   464 VVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSIL 528
                ||.|.||                           |:|              .:|.::.:|:
Mouse   301 ----DEVIQNC---------------------------PID--------------VRRPLYKNIV 320

  Fly   529 LVGSSAKLPGLAAWLEQRISQQVQS------------------EVNVLIKGMDAGMVAWKGAAIM 575
            |.|.|.........|::.:.:.|.:                  :|.|:...|....| |.|.:::
Mouse   321 LSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAV-WFGGSML 384

  Fly   576 SVLESARELWISQNDWQRHGLRVLRERSPF 605
            :......::..::.|::..|..:.|....|
Mouse   385 ASTPEFYQVCHTKKDYEEIGPSICRHNPVF 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 73/444 (16%)
Actr3NP_001192314.1 PTZ00280 2..417 CDD:240343 100/549 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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