DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and Actrt1

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_082790.1 Gene:Actrt1 / 73360 MGIID:1920610 Length:376 Species:Mus musculus


Alignment Length:514 Identity:87/514 - (16%)
Similarity:164/514 - (31%) Gaps:197/514 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 MADEPWLDREAPVLFDD-----RILRLGAVDARN------------------------------- 174
            |.|...||..| |:||:     ::...|.::.|:                               
Mouse     1 MLDPARLDNPA-VIFDNGSGLCKVGISGEIEPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQC 64

  Fly   175 -YD---IHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCAVLVVNDVY 235
             ||   :|:||:||           |......:|::|....|..|.:...:.........:|...
Mouse    65 MYDGLYLHYPIERG-----------LVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPQE 118

  Fly   236 VRRHLREFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARV 300
            .|....|   ::..:......:|...:|.:...:....|.|:|.|...|....:.:|.|...|..
Mouse   119 TREKTTE---IMFEKFNVPALYLCNHAVGALCASACITGLVLDSGDGVTCTVPVYEGYSLPHAIT 180

  Fly   301 RLSYGGGDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHLNASVCGAQEKHFNLRK 365
            :|...|.|:.:.|..||...|:.: .|.:.::.|     |::|||.|.::..       :.:..|
Mouse   181 KLYVAGRDITEHLTRLLLAKGYTF-PCILNKAVV-----DDIKEKLCTVSLG-------YKDTEK 232

  Fly   366 HNGQWLR-------YTIQVGDEALMAPLALFHTELLNI--TGRTKAVFTQQAVQDQYDCEDCFDA 421
            :..|:||       .|||:.|.....|..||..:.|.|  .|.:|.|              |   
Mouse   233 NCQQFLRKYTLPDGNTIQMSDHLCQVPEVLFTPDHLGIHDLGISKMV--------------C--- 280

  Fly   422 EYLKETGRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQ 486
                                                           .:|.||.:.:        
Mouse   281 -----------------------------------------------NSIMNCDTDI-------- 290

  Fly   487 MNSNGCYHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQV 551
                                             :..:|..|:|.|.:...||    |:.|:.:::
Mouse   291 ---------------------------------QENLFAEIVLSGGTTMFPG----LQDRLLKEL 318

  Fly   552 QSEVNVLIKG--------MDAGMVAWKGAAIMSVLESARELWISQNDWQRHGLRVLRER 602
            :   ::..:|        .|....||.|.::|:.:.:.:::|::..|::.:|..|::.:
Mouse   319 E---DLAFEGTPIKITASSDRCYSAWIGGSVMTSMTTFKQMWVTAEDFKEYGAFVVQRK 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 69/418 (17%)
Actrt1NP_082790.1 NBD_sugar-kinase_HSP70_actin 8..376 CDD:302596 84/507 (17%)
ACTIN 9..376 CDD:214592 83/506 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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