DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and Actrt2

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_082789.1 Gene:Actrt2 / 73353 MGIID:1920603 Length:377 Species:Mus musculus


Alignment Length:477 Identity:98/477 - (20%)
Similarity:162/477 - (33%) Gaps:158/477 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 KVPAPSGQMADEPWLDREAPVLFDDRILRLGAVDARNYDIHFPIQRGELNVHNEKGGSLQASMQH 202
            |.| |:|....:.::..||  |:....|.|          |:||.||           |..|...
Mouse    45 KAP-PTGASQKKYFVGEEA--LYKQEALSL----------HYPIDRG-----------LVTSWDD 85

  Fly   203 LERIWSYALEERLKI-PLRKLGTHCAVLVVNDVYVRRHLRE-FVTLLLRRLGFRRCFLVQDSVAS 265
            :|::|.:..|..|.: |..:     .|||.......|..|| ...::.........:|...:|.:
Mouse    86 VEKLWRHLFEWELGVKPCER-----PVLVTEPSLNPRENREKTAEMMFETFEVPAFYLSDQAVLA 145

  Fly   266 TFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCG--FPYRECN 328
            .:.:....|.|||.|...|....|.:|.|...|..:|...|.|:.::|..||...|  ||   |.
Mouse   146 LYSSACVTGLVVDSGDGVTCTVPIYEGYSLPHAVSKLYVAGKDITELLTRLLLASGRAFP---CP 207

  Fly   329 VQESYVDAHLLDELKEKFCHLNASVCGAQEKHFNLRKHNGQWLR-------YTIQVGDEALMAPL 386
            ::::     |.|::|||.|::      |.|....|.:.....||       ..|.:||:...||.
Mouse   208 LEKA-----LADDIKEKLCYV------ALEPEEELSRRAEDVLREYKLPDGNVIYIGDQLYQAPE 261

  Fly   387 ALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRGGDILQLSTSAGYQPRP 451
            .||..:.|                                     |..|..:.|::::       
Mouse   262 VLFSPDQL-------------------------------------GTHGPGLAQMASN------- 282

  Fly   452 QLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSINRLSS 516
                              :|:.|.:.:                                      
Mouse   283 ------------------SITKCDADI-------------------------------------- 291

  Fly   517 YETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNVLIKG-MDAGMVAWKGAAIMSVLES 580
               ::.:||.|:|.|.|....||...|.:.:.|.....|.:.|.. .|.....|.||:|::.|.|
Mouse   292 ---QKTLFGEIVLSGGSTLFQGLDDRLLKELEQLASKGVPIKITAPPDRWFSTWIGASIVTSLSS 353

  Fly   581 ARELWISQNDWQRHGLRVLRER 602
            .:::||:..|::..|:.|::.|
Mouse   354 FKQMWITAADFKEFGVSVVQRR 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 82/413 (20%)
Actrt2NP_082789.1 NBD_sugar-kinase_HSP70_actin 6..377 CDD:302596 98/477 (21%)
ACTIN 10..377 CDD:214592 98/477 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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