DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp8 and Actl10

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001165111.1 Gene:Actl10 / 70362 MGIID:1917612 Length:346 Species:Mus musculus


Alignment Length:437 Identity:77/437 - (17%)
Similarity:138/437 - (31%) Gaps:144/437 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 GELNVHNEKGGSLQASMQHLERIWSYALEERLKI-PLRKLGTHCAVLVVNDVYVRRHLREFVT-L 246
            |....|..|.| :......||.:|     |||.: .|:.......|||.:........||.|. |
Mouse    32 GVARAHPIKHG-VVVDWDALEGLW-----ERLMVGGLQVHPEQWPVLVSDSPSAPPKGREKVAEL 90

  Fly   247 LLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQ 311
            |...|....|.:...::.:....|...|..|:.||.......|..|.|...|..||:..|..|.:
Mouse    91 LFEALTVPACHMANTALLALCSIGAFSGLAVEAGAGVCHATPIYAGHSWHKATFRLNVAGSTLSR 155

  Fly   312 VLL-LLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHLN----ASVCG-AQEKHFNLRKHNGQW 370
            ... ||:..|.      ::|...:....:.:||::.|:::    ..:|. |:.:.......||.:
Mouse   156 YFRDLLVAACP------DLQLQGLSRKTVTQLKKRCCYVSLDFQGDICDPARHQRACFCLGNGCY 214

  Fly   371 LRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRG 435
            :|    :|.|....|..:|...||.                                        
Mouse   215 VR----LGSERFRCPEPIFQPSLLG---------------------------------------- 235

  Fly   436 GDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLV 500
                        .|.|.||..|                                           
Mouse   236 ------------HPEPGLPTLA------------------------------------------- 245

  Fly   501 LPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVN--------- 556
                   .|::.::.: ..:.::..:::|.|.|...||..    :|::.:::::..         
Mouse   246 -------FQALQKIPT-TLRTRLANTVVLAGGSTLFPGFV----ERMNLELEAQCRRHGYPALQP 298

  Fly   557 --VLIKGMDAGMVAWKGAAIMSVLESARELWISQNDWQRHGLRVLRE 601
              |...|.|..:  |.|.::|:.|.|.:..|:::..:|.||..::|:
Mouse   299 CLVAHPGRDTAV--WTGGSMMASLNSFQCRWMTRAMYQEHGPLLVRD 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 73/419 (17%)
Actl10NP_001165111.1 NBD_sugar-kinase_HSP70_actin 37..341 CDD:302596 75/428 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.