DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and Actr2

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001349828.1 Gene:Actr2 / 66713 MGIID:1913963 Length:399 Species:Mus musculus


Alignment Length:495 Identity:90/495 - (18%)
Similarity:162/495 - (32%) Gaps:184/495 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 PVLFDDRILR----LGAVDARN------------------YDIHFPIQRGELNVHNEKGGSLQAS 199
            |.|....|:|    :|.::.:|                  .::::|::.|.:...::        
Mouse    33 PALVGRPIIRSTTKVGNIEIKNNKKMDLMVGDEASELRSMLEVNYPMENGIVRNWDD-------- 89

  Fly   200 MQHLERIWSYAL-EERLKIPLRKLGTHCAVLVVN-DVYVRRHLREFVTLLLRRLGFRRCFLVQDS 262
            |:||   |.|.. .|:|.|..|    :|.:|:.. .:...::..:.|.::.....|...::...:
Mouse    90 MKHL---WDYTFGPEKLNIDTR----NCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQA 147

  Fly   263 VASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYREC 327
            |.:.:..|:..|.|||.|...|.|..:.:|.|......||...|.|:.:.|:.||...|:.:...
Mouse   148 VLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHS 212

  Fly   328 NVQESYVDAHLLDELKEKFCHLNASVCGAQEKHFNLRKHNGQWLRYT-------------IQVGD 379
                  .|...:..:|||.|::.          :|:.:.....|..|             |:||.
Mouse   213 ------ADFETVRMIKEKLCYVG----------YNIEQEQKLALETTVLVESYTLPDGRIIKVGG 261

  Fly   380 EALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRGGDILQLSTS 444
            |...||.|||...|:|:.|...|             |..|           |.::..||      
Mouse   262 ERFEAPEALFQPHLINVEGVGVA-------------ELLF-----------NTIQAADI------ 296

  Fly   445 AGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQ 509
                                                                             
Mouse   297 ----------------------------------------------------------------- 296

  Fly   510 SINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQ-----QVQSEVNVLIK--------G 561
                    :|:.:.:..|:|.|.|...|||.:.||:.:.|     .::.:|..|.|        .
Mouse   297 --------DTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPP 353

  Fly   562 MDAGMVAWKGAAIMSVLESARELWISQNDWQRHGLRVLRE 601
            ....||...||.:..:::.....|:::.::|..|:|||.:
Mouse   354 RRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 81/428 (19%)
Actr2NP_001349828.1 ACTIN 6..393 CDD:214592 90/493 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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