DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and Actr10

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_062759.2 Gene:Actr10 / 56444 MGIID:1891654 Length:417 Species:Mus musculus


Alignment Length:447 Identity:76/447 - (17%)
Similarity:146/447 - (32%) Gaps:179/447 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 PIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKI---------PLRKLGTHCAVLVVNDVY 235
            ||:..:.|::.|:             ::|| |:|.:.|         |..:     .|:|:..|.
Mouse    51 PIKVVQYNINTEE-------------LYSY-LKEFIHILYFRHLLVNPRDR-----RVVVIESVL 96

  Fly   236 VRRHLREFVT-LLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDAR 299
            ...|.||.:| :|.:........|....:.:....||....|:|.|.:::.:..|.:||..|:..
Mouse    97 CPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPILNCW 161

  Fly   300 VRLSYGGGDLDQVL-LLLLRKC----------GFPYRECNVQESYVDAHLLDELKEKFCHLNASV 353
            ..|..||..|.:.| ..||.:|          ..|....:|.|.     :|:::|.:.|.::...
Mouse   162 GALPLGGKALHKELETQLLEQCTVDTGAAKGQSLPSVMGSVPEG-----VLEDIKVRTCFVSDLK 221

  Fly   354 CGAQEKHFNLRKHNGQWLRYTIQVGDEALMAP----LALFHTELLNITGRTKAVFTQQAVQDQYD 414
            .|.|.          |..::.|...:|....|    ..|...::|::.|         :::|.. 
Mouse   222 RGLQI----------QAAKFNIDGNNERPTPPPNVDYPLDGEKILHVLG---------SIRDSV- 266

  Fly   415 CEDCFDAEYLKETGRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEE----LIVVDQDETISNCQ 475
                  .|.|.|                              .|:||    .:::|   ::..| 
Mouse   267 ------VEILFE------------------------------QDNEEKSVATLILD---SLLQC- 291

  Fly   476 SQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLA 540
                                      |:|              |::::..:::::|.::.|||..
Mouse   292 --------------------------PID--------------TRKQLAENLVIIGGTSMLPGFL 316

  Fly   541 AWLEQRISQQVQSEVNVLIK------------------GMDAGMVAWKGAAIMSVLE 579
                    .::.:|:..|::                  ...|..|||.|.|:...|:
Mouse   317 --------HRLLAEIRYLVEKPKYKKTLGTKNFRIHTPPAKANCVAWLGGAVFGALQ 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 72/425 (17%)
Actr10NP_062759.2 Actin 13..364 CDD:330363 75/444 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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