DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and actr2b

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_021336257.1 Gene:actr2b / 554861 ZFINID:ZDB-GENE-050410-4 Length:399 Species:Danio rerio


Alignment Length:491 Identity:89/491 - (18%)
Similarity:164/491 - (33%) Gaps:176/491 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 PVLFDDRILR----LGAVDARN------------------YDIHFPIQRGELNVHNEKGGSLQAS 199
            |.|....|:|    :|.::.:|                  .::::|::.|.:...::        
Zfish    33 PALVGRPIIRSTAKVGNIEIKNNKKMDLMVGDEASELRSMLEVNYPMENGIVRNWDD-------- 89

  Fly   200 MQHLERIWSYAL-EERLKIPLRKLGTHCAVLVVN-DVYVRRHLREFVTLLLRRLGFRRCFLVQDS 262
            |:||   |.|.. .|:|.|..|    .|.:|:.. .:...::..:.:.::.....|...::...:
Zfish    90 MKHL---WDYTFGPEKLNINSR----DCKILLTEPPMNPTKNREKIIEVMFETYQFTGVYIAIQA 147

  Fly   263 VASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYREC 327
            |.:.:..|:..|.|||.|...|.|..:.:|.|......||...|.|:.:.|:.||...|:.:...
Zfish   148 VLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHS 212

  Fly   328 NVQESYVDAHLLDELKEKFCHLNASVCGAQEKHFNLRK---------HNGQWLRYTIQVGDEALM 383
                  .|...:..:||..|::..::  .||:...|..         .:|:    .|:||.|...
Zfish   213 ------ADFETVRMMKENLCYVGYNI--EQEQKLALETTVLVESYTLPDGR----VIKVGGERFE 265

  Fly   384 APLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRGGDILQLSTSAGYQ 448
            ||.|||...|:|:.|...|             |..|           |.::..||          
Zfish   266 APEALFQPHLINVEGVGVA-------------ELLF-----------NTIQAADI---------- 296

  Fly   449 PRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSINR 513
                                                                             
Zfish   297 ----------------------------------------------------------------- 296

  Fly   514 LSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQ-----QVQSEVNVLIK--------GMDAG 565
                :|:.:.:..|:|.|.|...|||.:.||:.:.|     .::.:|:.|.|        .....
Zfish   297 ----DTRAEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVDKLSKFKIRIEDPPRRKH 357

  Fly   566 MVAWKGAAIMSVLESARELWISQNDWQRHGLRVLRE 601
            ||...||.:..:::.....|:::.::|..|:|||.:
Zfish   358 MVFLGGAVLADIMKDKDNFWLTREEYQEKGVRVLEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 80/424 (19%)
actr2bXP_021336257.1 ACTIN 6..393 CDD:214592 89/489 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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