DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp8 and zgc:101810

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001007773.1 Gene:zgc:101810 / 493612 ZFINID:ZDB-GENE-041121-7 Length:394 Species:Danio rerio


Alignment Length:486 Identity:84/486 - (17%)
Similarity:159/486 - (32%) Gaps:181/486 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 PVLFDDRILRLGAVDARN-------------YDIHFPIQRGELNVHNEKGGSLQASMQHLERIWS 208
            |::..|  .::|:::.::             .::.:|::.|           :..|.:.:..:|.
Zfish    39 PIIRSD--TKVGSIEIKDLMVGDEASECRSMLEVTYPMENG-----------MVRSWEDMIHLWD 90

  Fly   209 YAL-EERLKIPLRKLGTHCAVLV----VNDVYVRRHLREFVTLLLRRLGFRRCFLVQDSVASTFG 268
            :.. .:||.|.    ...|.||:    :|.:..|:.:.|   ::.....|...::...:|.:.:.
Zfish    91 HTFGPQRLNIS----PPDCKVLLTEPPMNPMKNRQKIAE---VMFETYRFHGIYVAIQAVLTLYA 148

  Fly   269 AGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYRECNVQESY 333
            .|:..|.|:|.|...|.|..:.:|.|......||...|.|:.:.|:.||...|:.:...      
Zfish   149 QGLLTGVVIDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHT------ 207

  Fly   334 VDAHLLDELKEKFCHLNASVCGAQEKHF---------NLRKHNGQWLRYTIQVGDEALMAPLALF 389
            .|...:..:|||.|.:..::  .||:..         :....:|:.:|    ||.|...||.|||
Zfish   208 ADFETVRMMKEKLCFVGYNI--EQEQQLANETTVLVESYMLPDGRMIR----VGGERFGAPEALF 266

  Fly   390 HTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRGGDILQLSTSAGYQPRPQLP 454
            ...|:|:.|...|             |..|           |.::..||                
Zfish   267 QPHLVNVEGVGVA-------------ELLF-----------NTIQAADI---------------- 291

  Fly   455 VTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSINRLSSYET 519
                                                                           :.
Zfish   292 ---------------------------------------------------------------DL 293

  Fly   520 KRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNVLIKG----------------MDAGMVA 568
            :..::..|:|.|.|...|||.:.||:.|.|.....|   :||                ....||.
Zfish   294 RADLYKHIVLSGGSTMYPGLPSRLEREIKQLYLERV---LKGDTEKLSKFKIRIEDPPRRKHMVF 355

  Fly   569 WKGAAIMSVLESARELWISQNDWQRHGLRVL 599
            ..||.:.::::.....|:|:.:::..||::|
Zfish   356 MGGAVLANIMKDKESFWLSRAEYEEKGLKLL 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 78/428 (18%)
zgc:101810NP_001007773.1 ACTIN 6..382 CDD:214592 81/480 (17%)
NBD_sugar-kinase_HSP70_actin 6..382 CDD:302596 81/480 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.