DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and actrt2

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001006111.1 Gene:actrt2 / 448563 XenbaseID:XB-GENE-22041684 Length:375 Species:Xenopus tropicalis


Alignment Length:488 Identity:85/488 - (17%)
Similarity:159/488 - (32%) Gaps:171/488 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 VPAPSGQMADEPWLDREAPVLFDDRILRLGAVDARNY------------DIHFPIQRGELNVHNE 191
            ||:..|.::              ||...|||.....|            |:.|||:.|       
 Frog    35 VPSVVGHLS--------------DRSAMLGAGQQPYYVGEMAMSKRAILDLVFPIKEG------- 78

  Fly   192 KGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCAVLVVNDVYVRRHLREFVTLLLRRLGFRRC 256
                :..|..::.:||.|..:..||.|..:   |...|....:...|:..:...:..........
 Frog    79 ----IVKSWDNMIKIWKYLYKYELKKPSSE---HPVFLTEAPLNPLRNRHKMAEIFFENFNVPAM 136

  Fly   257 FLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCG 321
            ::...:..:.:.:|:..|.|:|:||..|....|.||::...|..:|...|..:.|.|:.||.:.|
 Frog   137 YVSHQANLALYASGLTTGIVLDVGAGITHTVAIYDGVALPHAVSKLPVAGRTITQYLMKLLTENG 201

  Fly   322 FPYRECNVQESYVDAHLLDELKEKFCHLNASVCGAQE-------KHFNLRKHNGQWLRYTIQVGD 379
            :.:.....:|      ::.::|||.|::........|       |.:.|...|      .|::..
 Frog   202 YNFITAAERE------IVRDIKEKLCYIALDPSAEYERNPKDITKEYTLPDGN------VIKIDS 254

  Fly   380 EALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRGGDILQLSTS 444
            :...||.|||...  ||                                                
 Frog   255 QLFRAPEALFSPS--NI------------------------------------------------ 269

  Fly   445 AGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQ 509
                                                                 ||..|..|.:|.
 Frog   270 -----------------------------------------------------GLEAPGVQGLIN 281

  Fly   510 SINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEV--NVLIK---GMDAGMVAW 569
            :|.:....:.:|.:..:::|.|.|...||    .::|:.::::.:.  .|.||   ..|.....|
 Frog   282 NIIQKCPIDIRRALLSNVVLSGGSTLFPG----FDERVLRELEKKAPDGVQIKVLAATDRKYSVW 342

  Fly   570 KGAAIMSVLESARELWISQNDWQRHGLRVLRER 602
            .||:::|.::|.:|.||.::::...|..::.::
 Frog   343 IGASVLSSMDSFKENWIRKSEYDEFGPSIVHQK 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 70/413 (17%)
actrt2NP_001006111.1 ACTIN 9..375 CDD:214592 85/486 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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