DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp8 and actr8

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001005453.1 Gene:actr8 / 448046 XenbaseID:XB-GENE-6454262 Length:659 Species:Xenopus tropicalis


Alignment Length:669 Identity:209/669 - (31%)
Similarity:326/669 - (48%) Gaps:117/669 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PIGLPQPQAQPLEAPKIIVIHPGSQHLRIGRAADLNPLTLLHAVAYRRRPGASDRPHH------- 76
            |..:|:|...|:::..|:||||||..||||||.|..|..:.|.:|.|.|.|.  :|.|       
 Frog    28 PAAVPEPPQDPIQSDFIVVIHPGSSSLRIGRATDTQPAGIPHLIARRHRQGG--QPTHRDKWLLR 90

  Fly    77 DPLLPPLDNVNSNSGLMVEFEEQRLVVSRILQHCVVDNKNRLRVATPPQQLAHFNRSSQAEKVPA 141
            |.|..|..|....:||.        :|.:.:....:.|..| |:...|:|...:|:..:    ||
 Frog    91 DGLSKPESNEQRQNGLK--------MVDQAIWSKKMSNGTR-RIPVMPEQARSYNKQIR----PA 142

  Fly   142 PSGQMADEPWLD--REAPVLFDDRILRLGAVDARNYDIHFPIQRGELNVHNEKGGSLQASMQHLE 204
            .....:...|.|  .....|..:..|.:...|.  |::|:||:||:||:|:..||||.|.:..||
 Frog   143 ILDHDSGAKWTDTSHHPEYLVGEEALYVNPSDC--YNLHYPIRRGQLNLHSGPGGSLTAVLADLE 205

  Fly   205 RIWSYALEERLKIPLRKLGTHCAVLVVNDVYVRRHLREFVTLLLRRLGFRRCFLVQDSVASTFGA 269
            .|||:.|::.|:|.|:.|..:..:|::.|:|.|:|::|.|.:||.::||....:.|:||.:.:|:
 Frog   206 TIWSHVLQKMLEIQLKDLKYYRCILLIPDIYNRQHVKEMVNMLLMKMGFSGIIVHQESVCAMYGS 270

  Fly   270 GIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYRECNVQESYV 334
            |:...||||:|.||||:.|:|||||..:.|:.|:|||.|:.:.|..|:::.|||||:|.: .:|:
 Frog   271 GLSSACVVDVGDQKTSVCCVEDGISHRNTRLCLAYGGSDVTRCLYWLMQRAGFPYRDCQL-SNYL 334

  Fly   335 DAHLLDELKEKFCHL-----------------------------NASVCGAQEKHFNLRKHNGQW 370
            |..:|.:|||.|.||                             :..:.|.|:..|.:|......
 Frog   335 DCLVLQQLKESFAHLDQVGALSLLSCRCPECGTRRAPSVTVLFSSQDISGLQDHEFQVRHPAAPA 399

  Fly   371 LRYTIQVGDEAL-------------MAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAE 422
            |.|.:::|||.|             .||:|||:.....|   .:...|....:...|.||..|..
 Frog   400 LLYQLRLGDEKLQCQPIISLPPAPTQAPMALFYPATFGI---VEQKMTSMQHRSHGDPEDPHDEH 461

  Fly   423 YLKETGRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQM 487
            ||..|..|         |...:.....|..||..:..||....|..:.....:|:||:       
 Frog   462 YLLATQSK---------QEQAAKAAADRKALPKASLYEEGRAQDISDRAHMQESELGS------- 510

  Fly   488 NSNGCYHNG--------------------QGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGS 532
            :.|.|..:|                    :|..|.||:||:.||:..:|.:||:||:||:|:||.
 Frog   511 SQNDCLISGNDSEEPPAAMFSRKTAVSQFEGKALGLDKAILHSIDCCASDDTKKKMYGSVLVVGG 575

  Fly   533 SAKLPGLAAWLEQRI-------SQQVQSEVNVLI--KGMDAGMVAWKGAAIMSVLESARELWISQ 588
            .........:|:.||       .::|...|.|:.  |.||..::.|||.|:::.|::.:|||:.|
 Frog   576 GLMFHRAQQFLQHRILNKMPPSFRRVVDNVEVITRPKDMDPRLIVWKGGALLACLDTTQELWVYQ 640

  Fly   589 NDWQRHGLRVLRERSPFLW 607
            .:|||.|:|:||||:.|:|
 Frog   641 REWQRFGVRMLRERATFVW 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 146/471 (31%)
actr8NP_001005453.1 NBD_sugar-kinase_HSP70_actin 163..653 CDD:327376 160/511 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 177 1.000 Domainoid score I3536
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H11286
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1258783at2759
OrthoFinder 1 1.000 - - FOG0005819
OrthoInspector 1 1.000 - - oto105236
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4212
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.010

Return to query results.
Submit another query.