DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and actr1b

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_998537.1 Gene:actr1b / 406681 ZFINID:ZDB-GENE-040426-2695 Length:376 Species:Danio rerio


Alignment Length:432 Identity:71/432 - (16%)
Similarity:148/432 - (34%) Gaps:132/432 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 IHFPIQRGELNVHNEKGGSLQASMQHLERIWSYAL-EERLKIPLRKLGTHCAVLVVNDVYVRRHL 240
            :.:|::.|.:...|:           :||||.|.. :|:|:....:   |..:|....:...::.
Zfish    71 VRYPMEHGIVKDWND-----------MERIWQYVYSKEQLQTFSEE---HPVLLTEAPLNPSKNR 121

  Fly   241 REFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYG 305
            .....:..........|:...:|.|.:..|...|.|:|.|...|....|.:|.:...:.:|:...
Zfish   122 ERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVTHAVPIYEGFAIPHSIMRVDIA 186

  Fly   306 GGDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHLNASVCGAQEKHFNLRKHNGQW 370
            |.|:.:.|.|||||.|:.:      .:..:..::..:||:.|:|:.:    .:|...|.....|:
Zfish   187 GRDVSRYLRLLLRKEGYDF------HTSAEFEVVRTIKERACYLSLN----PQKDETLETEKAQY 241

  Fly   371 L---RYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNG 432
            .   ..|:.:|.....||..||                                           
Zfish   242 TLPDGSTLDIGPARFRAPELLF------------------------------------------- 263

  Fly   433 VRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQ 497
                             ||.|                        :|.::.|             
Zfish   264 -----------------RPDL------------------------IGDESEG------------- 274

  Fly   498 GLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNVLIKGM 562
                 :.:.:..:|.: |..:.:|.:|.:|:|.|.|..|.|....|...:.:....:|.:.|...
Zfish   275 -----IHEVLAFAIQK-SDMDLRRTLFSNIVLSGGSTLLKGFGDRLLSEVKKLAPKDVKIKISAP 333

  Fly   563 DAGMVA-WKGAAIMSVLESARELWISQNDWQRHGLRVLRERS 603
            ...:.: |.|.:|::.|::.:::|:|:.:::....|.:..::
Zfish   334 QERLYSTWIGGSILASLDTFKKMWVSKKEYEEDRARAIHRKT 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 68/405 (17%)
actr1bNP_998537.1 NBD_sugar-kinase_HSP70_actin 5..376 CDD:418402 71/432 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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