DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and actl6a

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_989337.1 Gene:actl6a / 394962 XenbaseID:XB-GENE-491948 Length:429 Species:Xenopus tropicalis


Alignment Length:483 Identity:84/483 - (17%)
Similarity:158/483 - (32%) Gaps:149/483 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 REAPVLFDDRILRLGAVDARNYDIHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIP 218
            |......|...||   |...|.:...|::.|.:    |...|.||.:.|     :|....:.:..
 Frog    64 RSPTYYIDTNSLR---VPRENMEAFSPLKNGMI----EDWDSFQAIIDH-----TYKTHIKSETN 116

  Fly   219 LRKLGTHCAVLVVNDVYVRRHLREFVT-LLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQ 282
            |.      .||:....:..|..||.:| |:.........||.:.:|.:.|..|...|.::|.|:.
 Frog   117 LH------PVLMSEAAWNTRVKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGST 175

  Fly   283 KTSIACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLD------- 340
            .|:...:.||.......|:....|.       .:..:|...::|..|  ..:..:::.       
 Frog   176 HTTAIPVHDGYVLQQGIVKSPLAGD-------FITMQCRELFQEMTV--DLIPPYMIASKEAVRE 231

  Fly   341 ------ELKEKFCHLNAS----VCGAQEKHFNLRKHNGQWLRYTIQVGDEALMAPLALFHTELLN 395
                  :.|||...:..|    :|....:.|     ....|:.:....||.:.|.:...|.|..|
 Frog   232 GATPNWKRKEKLPQVTRSWHNYMCNCVIQDF-----QASVLQVSDSTYDEQVAAQMPTVHYEFPN 291

  Fly   396 ITGRTKAVFTQQAVQDQYDCEDCFDAEYLK------ETGRKNGVRGGDILQLS----TSAGYQPR 450
                            .|:|:  |.||.||      :.....|:.|..:|.:|    ||.|    
 Frog   292 ----------------GYNCD--FGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVG---- 334

  Fly   451 PQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSINRLS 515
                                                                           :.
 Frog   335 ---------------------------------------------------------------MC 336

  Fly   516 SYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNV-LIKG---MDAGMVAWKGAAIMS 576
            ..:.:..::||:::.|.:..|.|....|.:.:||:....:.: ||..   ::....:|.|.:|::
 Frog   337 DIDIRPGLYGSVIVAGGNTLLQGFTDRLTRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILA 401

  Fly   577 VLESARELWISQNDWQRHGLRVLRERSP 604
            .|.:.:::|||:.:::..|.:.:..:.|
 Frog   402 SLGTFQQMWISKQEYEEGGKQCVERKCP 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 71/432 (16%)
actl6aNP_989337.1 Actin 11..429 CDD:306521 83/481 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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