DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and actg1

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_989332.1 Gene:actg1 / 394957 XenbaseID:XB-GENE-491618 Length:375 Species:Xenopus tropicalis


Alignment Length:436 Identity:69/436 - (15%)
Similarity:150/436 - (34%) Gaps:139/436 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 IHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCAVLVVNDVYVRRHLR 241
            :.:||:.|           :..:...:|:||.:.....|::...:   |..:|....:..:.:..
 Frog    67 LKYPIEHG-----------IVTNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANRE 117

  Fly   242 EFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGG 306
            :...::.........::...:|.|.:.:|...|.|:|.|...|....|.:|.:...|.:||...|
 Frog   118 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 182

  Fly   307 GDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHL---------NASVCGAQEKHFN 362
            .||...|:.:|.:.|:.:      .:..:..::.::|||.|::         .|:...:.||.:.
 Frog   183 RDLTDYLMKILTERGYSF------TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

  Fly   363 LRKHNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKET 427
            |  .:||    .|.:|:|....|.|||                                      
 Frog   242 L--PDGQ----VITIGNERFRCPEALF-------------------------------------- 262

  Fly   428 GRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGC 492
                                ||                          |.||.::.|        
 Frog   263 --------------------QP--------------------------SFLGMESCG-------- 273

  Fly   493 YHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNV 557
                      :.:....||.: ...:.::.::.:.:|.|.:...||:|..:::.|:....|.:.:
 Frog   274 ----------IHETTFNSIMK-CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 327

  Fly   558 -LIKGMDAGMVAWKGAAIMSVLESARELWISQNDWQRHGLRVLRER 602
             :|...:.....|.|.:|::.|.:.:::|||:.::...|..::..:
 Frog   328 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 66/411 (16%)
actg1NP_989332.1 PTZ00281 1..375 CDD:173506 69/436 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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