DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and actc1

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_989094.1 Gene:actc1 / 394698 XenbaseID:XB-GENE-480347 Length:377 Species:Xenopus tropicalis


Alignment Length:436 Identity:68/436 - (15%)
Similarity:150/436 - (34%) Gaps:139/436 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 IHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCAVLVVNDVYVRRHLR 241
            :.:||:.|           :..:...:|:||.:.....|::...:   |..:|....:..:.:..
 Frog    69 LKYPIEHG-----------IITNWDDMEKIWHHTFYNELRVAPEE---HPTLLTEAPLNPKANRE 119

  Fly   242 EFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGG 306
            :...::.........::...:|.|.:.:|...|.|:|.|...|....|.:|.:...|.:||...|
 Frog   120 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAG 184

  Fly   307 GDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHL---------NASVCGAQEKHFN 362
            .||...|:.:|.:.|:.:      .:..:..::.::|||.|::         .|:...:.||.:.
 Frog   185 RDLTDYLMKILTERGYSF------VTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

  Fly   363 LRKHNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKET 427
            |  .:||    .|.:|:|....|..||                                      
 Frog   244 L--PDGQ----VITIGNERFRCPETLF-------------------------------------- 264

  Fly   428 GRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGC 492
                                ||                          |.:|.::||        
 Frog   265 --------------------QP--------------------------SFIGMESAG-------- 275

  Fly   493 YHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNV 557
                      :.:....||.: ...:.::.::.:.:|.|.:...||:|..:::.|:....|.:.:
 Frog   276 ----------IHETTYNSIMK-CDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKI 329

  Fly   558 -LIKGMDAGMVAWKGAAIMSVLESARELWISQNDWQRHGLRVLRER 602
             :|...:.....|.|.:|::.|.:.:::|||:.::...|..::..:
 Frog   330 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRK 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 65/411 (16%)
actc1NP_989094.1 PTZ00281 4..377 CDD:173506 68/436 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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