DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and Actrt3

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001102412.1 Gene:Actrt3 / 365763 RGDID:1561457 Length:371 Species:Rattus norvegicus


Alignment Length:466 Identity:86/466 - (18%)
Similarity:163/466 - (34%) Gaps:157/466 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 APVLFDDRILRLG--AVDARNY-DIHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKI 217
            :|.....:.||:|  |.:.|:: .|.:|::||           |.:|...:|.:|.:..:..|.:
  Rat    42 SPAADSKQELRVGDQAQERRSFLSISYPVERG-----------LISSWGDMEIMWKHIYDYNLNL 95

  Fly   218 -PLRKLGTHCAVLV----VNDVYVRRHLREFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVV 277
             |     :...|||    :|.:..|:|:.|   :....||....::...:|.:.|.||...|.|:
  Rat    96 NP-----SDGPVLVTEPALNPLADRQHISE---VFFENLGVPAFYMSVQAVLALFAAGFTTGLVL 152

  Fly   278 DIGAQKTSIA------CIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYRECNVQESYVDA 336
            :.||..|...      |:..|:.||:.      .|.||...|::||:..|.......      |.
  Rat   153 NSGAGITQCVPIFEGYCLSHGVKQLNV------AGIDLTNYLMMLLKDDGIMLLRTG------DR 205

  Fly   337 HLLDELKEKFCHLNASVCGAQEKHFNLRK----HNGQWLRYTIQVGDEALMAPLALFHTELLNIT 397
            ..:.::||..|::..:......|..|:.|    .:|:    |:::..:....|.|||...|:|: 
  Rat   206 KTVTDIKENACYVAMNYDEEMVKESNVEKMYTLPDGK----TVKLRKQVFRCPEALFSPYLVNV- 265

  Fly   398 GRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEEL 462
                                  ||.            |.|.:..|                    
  Rat   266 ----------------------DAP------------GIDRICFS-------------------- 276

  Fly   463 IVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSI 527
                   :|..|.:.|                                         :...|.:|
  Rat   277 -------SIMKCDADL-----------------------------------------RNSFFSNI 293

  Fly   528 LLVGSSAKLPGLAAWLEQRISQQVQSEVNV-LIKGMDAGMVAWKGAAIMSVLESARELWISQNDW 591
            :|.|.|...|||...|.:.:::...:...| ::...:..:..|.|.:|::.|.:.:::||:..::
  Rat   294 ILSGGSTSFPGLDKRLIKDVAKLAPANTTVQVVAPPERKISVWMGGSILASLSAFQDMWITAAEF 358

  Fly   592 QRHGLRVLRER 602
            :..|..::.:|
  Rat   359 EEVGPNIVHQR 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 74/417 (18%)
Actrt3NP_001102412.1 ACTIN 5..371 CDD:214592 86/466 (18%)
NBD_sugar-kinase_HSP70_actin 9..371 CDD:302596 86/466 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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