DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp8 and Actr8

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001296388.1 Gene:Actr8 / 361107 RGDID:1311878 Length:624 Species:Rattus norvegicus


Alignment Length:629 Identity:208/629 - (33%)
Similarity:331/629 - (52%) Gaps:65/629 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RHPAPPPIGLPQPQAQPLEAPKIIVIHPGSQHLRIGRAADLNPLTLLHAVAYRRRPGASDRPHHD 77
            :.|..|.: :|:...:.:::..|:|:||||..||||||.|..|.::.|.:|.|          |.
  Rat    27 KRPIVPAL-VPESLQEQIQSNFIVVVHPGSTTLRIGRATDTLPASIPHVIARR----------HK 80

  Fly    78 PLLPPL--DNVNSNSGL-MVEFEEQR----LVVSRILQHCVVDNKNRLRVATPPQQLAHFNRSSQ 135
            ....||  ||.....|| ..|..|||    .:|.:.:....:.|..| |:...|:|...:|:..:
  Rat    81 QQGQPLYKDNWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSNGTR-RIPVSPEQTRSYNKQMR 144

  Fly   136 AEKVPAPSGQMADEPWLD--REAPVLFDDRILRLGAVDARNYDIHFPIQRGELNVHNEKGGSLQA 198
                ||.....:...|.:  .:...|..:..|.:..:|.  |:||:||:||:||:|...||||.|
  Rat   145 ----PAILDHCSGNKWTNTSHQPEYLVGEEALYVNPLDC--YNIHWPIRRGQLNIHPGPGGSLTA 203

  Fly   199 SMQHLERIWSYALEERLKIPLRKLGTHCAVLVVNDVYVRRHLREFVTLLLRRLGFRRCFLVQDSV 263
            .:..:|.|||:|:::.|:|||:.|..:..:|::.|:|.::|::|.|.::|.::||....:.|:||
  Rat   204 VLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVHMILMKMGFAGIVVHQESV 268

  Fly   264 ASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYRECN 328
            .:|||:|:...||||:|.||||:.|:|||:|..:.|:.|:|||.|:.:....|:::.|||||||.
  Rat   269 CATFGSGLSSTCVVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQ 333

  Fly   329 VQESYVDAHLLDELKEKFCHLNASVCGAQEKHFNLRKHNGQWLRYTIQVGDEALMAPLALFHTEL 393
            :... :|..||..|||.||||:..:.|.|:..|.:|..:...|.|..::|||.|.||:|||:...
  Rat   334 LANK-MDCLLLQHLKETFCHLDQDISGLQDHEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPAT 397

  Fly   394 LNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRK---NGVRGGDILQLSTSAGYQ-----PR 450
            ..|.|:.......::   |.|.||..|..||..|..|   :.....|....|...|::     ..
  Rat   398 FGIVGQKMTTLQHRS---QGDPEDPHDEHYLLATQSKQEQSAKATADRKSASKPIGFEGDLRGQS 459

  Fly   451 PQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQ--------MNSNGCYHNGQGLVLPLDQAI 507
            ..||.....:|   ||...:..:|      ..||.:        |:........:|..|.||:||
  Rat   460 SDLPERLHSQE---VDLASSQGDC------LMAGNESEEALTALMSRKTAISLFEGKALGLDKAI 515

  Fly   508 IQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRI-------SQQVQSEVNVLI--KGMD 563
            :.|::..||.:||:||:.|||:||..........:|:.||       .:::...|:|:.  |.||
  Rat   516 LHSVDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMD 580

  Fly   564 AGMVAWKGAAIMSVLESARELWISQNDWQRHGLRVLRERSPFLW 607
            ..:::|||.|:::.|::.:||||.|.:|||.|:|:||||:.|:|
  Rat   581 PRLISWKGGAVLACLDTTQELWIYQREWQRFGVRMLRERAAFVW 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 146/425 (34%)
Actr8NP_001296388.1 NBD_sugar-kinase_HSP70_actin 162..619 CDD:418402 163/471 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335878
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11286
Inparanoid 1 1.050 325 1.000 Inparanoid score I2403
OMA 1 1.010 - - QHG52058
OrthoDB 1 1.010 - - D1258783at2759
OrthoFinder 1 1.000 - - FOG0005819
OrthoInspector 1 1.000 - - oto98544
orthoMCL 1 0.900 - - OOG6_104893
Panther 1 1.100 - - LDO PTHR11937
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4212
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.770

Return to query results.
Submit another query.