DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and actr8

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001001400.1 Gene:actr8 / 326866 ZFINID:ZDB-GENE-030131-5065 Length:623 Species:Danio rerio


Alignment Length:614 Identity:202/614 - (32%)
Similarity:326/614 - (53%) Gaps:47/614 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PIGLPQPQAQPLEAPKIIVIHPGSQHLRIGRAADLNPLTLLHAVAYR-RRPGASDRPHHDPLLPP 82
            |..:|:|..:.::|..|:||||||:.||:|||.|..|:::.|.:|.| :.||.|.......|...
Zfish    32 PAAVPEPVQEQIQANFIVVIHPGSRTLRLGRATDTLPISVPHVIARRHKHPGQSRYEDKCLLREG 96

  Fly    83 LDNVNSNSGLMVEFEEQR----LVVSRILQHCVVDNKNRLRVATPPQQLAHFNRSSQAEKVPAPS 143
            |::.:||        |||    .:|.:::....:.|..| |.....:|...:||..:    ||..
Zfish    97 LNSADSN--------EQRQNGLKMVDQVIWSKKMSNGVR-RTPVSAEQARLYNRQIR----PAVL 148

  Fly   144 GQMADEPWLD--REAPVLFDDRILRLGAVDARNYDIHFPIQRGELNVHNEKGGSLQASMQHLERI 206
            ...:...|.:  .....:..:..|.:...|.  |.:|:|:.||.||:|:..||||.|.|..||.|
Zfish   149 DPNSKVSWTNTSHHPEYVVGEEALYVNPTDC--YSVHWPVCRGRLNLHSGSGGSLSAVMMDLEHI 211

  Fly   207 WSYALEERLKIPLRKLGTHCAVLVVNDVYVRRHLREFVTLLLRRLGFRRCFLVQDSVASTFGAGI 271
            |::||::.|:|||:.|..:..:|::.|:|.|:|::|.|.:||.::||....:.|:||.:|||:|:
Zfish   212 WTHALQKLLQIPLKDLKYYRCILLIPDIYNRQHVKEIVNMLLVKMGFSAVVVHQESVCATFGSGL 276

  Fly   272 GYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYRECNVQESYVDA 336
            ...||||:|.||||:.|:|||:|...:|:.|:|||.|:.:....|:::.|||||:|.:... :|.
Zfish   277 SSACVVDVGDQKTSVCCVEDGVSHRSSRLCLAYGGSDVTRCFFWLMQRAGFPYRDCQLGNK-LDC 340

  Fly   337 HLLDELKEKFCHLNASVCGAQEKHFNLRKHNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTK 401
            .||.:|||.||||:..:.|.|:..|..|..:...|.|.:::|||.|.||:.||:.....|.|:. 
Zfish   341 VLLQQLKESFCHLDQDISGLQDHEFRTRFPDSPVLLYQLRLGDEKLQAPMTLFYPAAFGIVGQR- 404

  Fly   402 AVFTQQAVQDQYDCEDCFDAEYLKETGRK---NGVRGGDILQLSTSAGYQPRPQLPVTADDEELI 463
              .|....:.|.|.||..|..:|..|..|   :.....|.......:.::....:...:|...| 
Zfish   405 --MTSLLHRSQGDAEDPHDEHFLLTTQSKQDQSSKASADRKSFPKPSSFEGESSVCEVSDRSSL- 466

  Fly   464 VVDQDETISNCQSQL---GA---QTAGGQMNSNGCYHNGQGLVLPLDQAIIQSINRLSSYETKRK 522
              .||..:.:.|::.   ||   :|....::........:|..|.:|:||:.||:..:|.|||||
Zfish   467 --GQDLDLGHSQAECLVGGAETEETPSALLSRKTAMSQFEGKALGIDKAILHSIDSCASDETKRK 529

  Fly   523 MFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNVLI---------KGMDAGMVAWKGAAIMSVL 578
            |:..||:||......|...:|:.||..::......::         |..||.:..|||.::::.|
Zfish   530 MYSCILVVGGGLLFHGAQEFLQHRILNKMPPSFRCMVESVDVITRPKDTDARVCVWKGGSVLACL 594

  Fly   579 ESARELWISQNDWQRHGLRVLRERSPFLW 607
            ::.:||||.|.:|||.|:|:||||:.|:|
Zfish   595 DTTQELWIHQREWQRFGVRMLRERAAFVW 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 142/418 (34%)
actr8NP_001001400.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
NBD_sugar-kinase_HSP70_actin 207..617 CDD:302596 140/416 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 428..458 3/29 (10%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575127
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11286
Inparanoid 1 1.050 331 1.000 Inparanoid score I2427
OMA 1 1.010 - - QHG52058
OrthoDB 1 1.010 - - D1258783at2759
OrthoFinder 1 1.000 - - FOG0005819
OrthoInspector 1 1.000 - - oto40655
orthoMCL 1 0.900 - - OOG6_104893
Panther 1 1.100 - - LDO PTHR11937
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R86
SonicParanoid 1 1.000 - - X4212
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.940

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