DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and Arp2

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster


Alignment Length:448 Identity:78/448 - (17%)
Similarity:145/448 - (32%) Gaps:150/448 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 DIHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCAVLVVNDVYVRRHL 240
            ::.:|::.|.:...::        |.|   :|.|....: |:.:....|. .:|....:...::.
  Fly    74 EVSYPMENGVVRNWDD--------MCH---VWDYTFGPK-KMDIDPTNTK-ILLTEPPMNPTKNR 125

  Fly   241 REFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYG 305
            .:.:.::..:.||...::...:|.:.:..|:..|.|:|.|...|.|..:.:..:......||...
  Fly   126 EKMIEVMFEKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIA 190

  Fly   306 GGDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHLNASVCGAQEKHFNLRK----- 365
            |.|:.:.|:.||...|:.:...      .|...:..:|||.|::...:  ..|:...|..     
  Fly   191 GRDITRYLIKLLLLRGYAFNHS------ADFETVRIMKEKLCYIGYDI--EMEQRLALETTVLVE 247

  Fly   366 ----HNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKE 426
                .:|:    .|:||.|...||.|||...|:|:.|...|......:|                
  Fly   248 SYTLPDGR----VIKVGGERFEAPEALFQPHLINVEGPGIAELAFNTIQ---------------- 292

  Fly   427 TGRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNG 491
                             :|....||:|                                      
  Fly   293 -----------------AADIDIRPEL-------------------------------------- 302

  Fly   492 CYHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQ-----QV 551
                                            :..|:|.|.|...|||.:.||:.|.|     .:
  Fly   303 --------------------------------YKHIVLSGGSTMYPGLPSRLEREIKQLYLERVL 335

  Fly   552 QSEVNVLIK--------GMDAGMVAWKGAAIMSVLESARELWISQNDWQRHGLRVLRE 601
            :::...|.|        .....||...||.:..|.:.....|:|:.::|..||:||::
  Fly   336 KNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 75/422 (18%)
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 78/446 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467802
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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