DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp8 and Actl9

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001101547.1 Gene:Actl9 / 314659 RGDID:1306886 Length:415 Species:Rattus norvegicus


Alignment Length:638 Identity:107/638 - (16%)
Similarity:174/638 - (27%) Gaps:291/638 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GLPQPQAQP------------------LEAPKI-------------IVIHPGSQHLRIGRAADLN 54
            |.|:||..|                  ||....             :||..|:...::|.|....
  Rat     5 GYPKPQPSPETHGPPSLTSNTVLVSKNLEQDSFSVVGDRFPLKTGAVVIDMGTGTCKVGFAGQSQ 69

  Fly    55 P----------------------LTLLHAVAYRRRPGASDRPHHDPLLPPLDNVNSNSGLMVEFE 97
            |                      |......|.|.||...       |:.|:.|     |::|::|
  Rat    70 PTYSVATILGCQPKKQATKGQSELETFIGEAARSRPELR-------LVKPIRN-----GIVVDWE 122

  Fly    98 EQRLVVSRILQHCVVDNKNRLRVATPPQQLAHFNRSSQAEKVPAPSGQMADEPWLDREAPVLFDD 162
            ...|:...||:|       .|||||                               :|.|:||.|
  Rat   123 AAELIWRHILEH-------DLRVAT-------------------------------QEHPLLFSD 149

  Fly   163 RILRLGAVDARNYDIHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCA 227
            .                |.                :...:.|::...|.|          ..|..
  Rat   150 P----------------PF----------------SPATNREKLVEVAFE----------SLHSP 172

  Fly   228 VLVVNDVYVRRHLREFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDG 292
            .|                           ::...||.|.:..|...|.|||.|...:....:..|
  Rat   173 AL---------------------------YVASQSVLSVYAHGRVNGLVVDTGHGVSYTVPVVQG 210

  Fly   293 ISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHL-----NAS 352
            .:...|..||...|..|...|..::...||     ::|:.  |..|::.:|..:|:|     ...
  Rat   211 YNLPHAIQRLDLAGNHLTAFLAEMILGSGF-----SLQQE--DLDLVENIKHHYCYLASDFQKEQ 268

  Fly   353 VCGAQEKHFNLRKHNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCED 417
            ....||....||..:|:    |:.:|.|....|..|||..  .|.|                   
  Rat   269 ARPDQECKQTLRLPDGR----TVTLGKELFQCPELLFHPP--EIPG------------------- 308

  Fly   418 CFDAEYLKETGRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQT 482
                  |...|                        ||..| ::.|:.|.||              
  Rat   309 ------LSPMG------------------------LPAMA-EQSLLRVPQD-------------- 328

  Fly   483 AGGQMNSNGCYHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRI 547
                                |...:.|                :::|.|.|:...||.:.....:
  Rat   329 --------------------LRPHVAQ----------------NVILCGGSSLFTGLESRFRAEL 357

  Fly   548 SQQVQSEVNVLIKGM-DAGMVAWKGAAIMSVLESARELWISQNDWQRHGLRVL 599
            .:.:..|.:|::... :..:..|.|.:|::.|.:.:..|:.:..::..|.:|:
  Rat   358 LRSLSPEDHVVVMAQPNRNLSVWIGGSILASLHAFQSCWVLREQYEEMGPQVV 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 68/404 (17%)
Actl9NP_001101547.1 NBD_sugar-kinase_HSP70_actin 46..415 CDD:302596 100/597 (17%)
Actin 48..414 CDD:278451 100/595 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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