DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and Actr1a

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_006231532.1 Gene:Actr1a / 294010 RGDID:1307025 Length:396 Species:Rattus norvegicus


Alignment Length:477 Identity:83/477 - (17%)
Similarity:163/477 - (34%) Gaps:150/477 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 QAEKVPAPSGQMADEPWLDREAPVLFDDRILRLGAVDARN-YDIHFPIQRGELNVHNEKGGSLQA 198
            :||.:|:|:.:.:.   |.|          ..|...:.|. ..|.:|::.|.:...|:       
  Rat    61 KAEVIPSPTEEASG---LQR----------AYLSTTEHRGLLSIRYPMEHGIVKDWND------- 105

  Fly   199 SMQHLERIWSYALEERLKIPLRKLG-THCAVLVVNDVYVRRHLREFVTLLLRRLGFRRCFLVQDS 262
                :||||.|...   |..|:... .|..:|....:..|::......:..........|:...:
  Rat   106 ----MERIWQYVYS---KDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFETFNVPALFISMQA 163

  Fly   263 VASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYREC 327
            |.|.:..|...|.|:|.|...|....|.:|.:...:.:|:...|.|:.:.|.|.|||.|:.:   
  Rat   164 VLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDF--- 225

  Fly   328 NVQESYVDAHLLDELKEKFCHLNASVCGAQEKHFNLRKHNGQWLRY-----TIQVGDEALMAPLA 387
               .|..:..::..:||:.|:|:.:    .:|...|.....|:  |     ||::|.....||..
  Rat   226 ---HSSSEFEIVKAIKERACYLSIN----PQKDETLETEKAQY--YLPDGSTIEIGPSRFRAPEL 281

  Fly   388 LFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRGGDILQLSTSAGYQPRPQ 452
            ||                                                            ||.
  Rat   282 LF------------------------------------------------------------RPD 286

  Fly   453 LPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSINRLSSY 517
            |                        :|.::.|                  :.:.::.:|.: |..
  Rat   287 L------------------------IGEESEG------------------IHEVLVFAIQK-SDM 308

  Fly   518 ETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNVLIKGMDAGMVA-WKGAAIMSVLESA 581
            :.:|.:|.:|:|.|.|....|....|...:.:....:|.:.|......:.: |.|.:|::.|::.
  Rat   309 DLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTF 373

  Fly   582 RELWISQNDWQRHGLRVLRERS 603
            :::|:|:.:::..|.|.:..::
  Rat   374 KKMWVSKKEYEEDGARSIHRKT 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 71/407 (17%)
Actr1aXP_006231532.1 NBD_sugar-kinase_HSP70_actin 5..396 CDD:418402 83/477 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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