DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and Actl9b

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001013915.1 Gene:Actl9b / 292516 RGDID:1359476 Length:411 Species:Rattus norvegicus


Alignment Length:421 Identity:69/421 - (16%)
Similarity:131/421 - (31%) Gaps:126/421 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 RGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCAVLVVND--VYVRRHLREFVT 245
            |.||.:.:.....:....:..|.||.:.||..|     :|.|....|:..|  .....:..:.|.
  Rat   100 RPELTLMHPVRNGIVVDWEAAEFIWRHILENDL-----RLDTQDHPLLFTDPPFNPASNREKLVE 159

  Fly   246 LLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLD 310
            :....|.....::...||.|.:..|...|.|||.|...:....:..|.:......|:...|..|.
  Rat   160 VAFESLHSPAIYVASQSVLSVYANGRVNGLVVDTGHGVSYTVPVFQGYNLPSGIQRMDLAGHYLT 224

  Fly   311 QVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHLNASV---CGAQEKHFN--LRKHNGQW 370
            :.|...:.:..|..::       .|...::.:|:::|::....   .|..::.|.  |:..:|| 
  Rat   225 KFLAEKILRSSFAVKK-------EDMDTMENIKQQYCYVALDFQKEQGRPDEKFRRCLKLPDGQ- 281

  Fly   371 LRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRG 435
               .|.||.|....|..|||.                                            
  Rat   282 ---MITVGKELFQCPELLFHP-------------------------------------------- 299

  Fly   436 GDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLV 500
                              |.|:.                .|.||                     
  Rat   300 ------------------PDTSG----------------PSSLG--------------------- 309

  Fly   501 LPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNVLIKGM-DA 564
              |...:..|::.:.. |.:..|..::||.|.|:...|.....:..:.:::..|.:|::... :.
  Rat   310 --LPSMVEHSLSTVPQ-ELRADMEQNVLLCGGSSLFTGFEGRFKTELLRRLGPEAHVVVVAQANR 371

  Fly   565 GMVAWKGAAIMSVLESARELWISQNDWQRHG 595
            .:..|.|.:|::.|.:.:..|:.:..::.||
  Rat   372 NLSVWIGGSILASLCAFQTRWVLREQYEEHG 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 66/402 (16%)
Actl9bNP_001013915.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
NBD_sugar-kinase_HSP70_actin 45..410 CDD:302596 69/421 (16%)
Actin 47..411 CDD:278451 69/421 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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