DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and arp8

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_593450.2 Gene:arp8 / 2543563 PomBaseID:SPAC664.02c Length:662 Species:Schizosaccharomyces pombe


Alignment Length:608 Identity:177/608 - (29%)
Similarity:296/608 - (48%) Gaps:77/608 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KIIVIHPGSQHLRIGRAADLNPLTLLHAVAYR-RRPGASDRPHHDPLLPPLDNVNSNSGLMV--E 95
            |.||:|.|||:||||.|::..|.|:...:|.: |.|.|.:|    .||..:.:||.:..:..  |
pombe    96 KTIVLHIGSQNLRIGLASNKTPTTVPMVIARKMRAPFAQER----CLLKDICHVNEDGNVAFDSE 156

  Fly    96 FEEQRLVVSRILQHCVVDNKNRLRVATPPQQLAHFNRSSQAEKVPAPSGQMADEPWL----DREA 156
            |:....::...|:..:...|.| .|....|.:.::|:.|:.|.|| |........|:    |...
pombe   157 FDSNLKLLDSELKSWLKAQKKR-SVPNGTQLVKNYNKISKPETVP-PDDDPEKPDWIHFEQDDHV 219

  Fly   157 PVLFDDRILRLGAVDARNYDIHFPIQRGELNVHNEKG-GSLQASMQHLERIWSYALEERLKIPLR 220
            .|:.......|...:...|.:.:||:.|   |.||.. .|.|..:..:..|:.|::...|:||:.
pombe   220 DVICGKEAFLLPLNEYPEYKLFYPIKSG---VFNESDYASSQQLLADIYEIFKYSITSLLQIPVS 281

  Fly   221 KLGTHCAVLVVNDVYVRRHLREFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTS 285
            :|..:..:.:|.|:|.|.::.:.:.:|...|.|.:..:||:|:.::||||:...||||:||||||
pombe   282 QLSQYSVIFIVPDLYDRVYVEKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTS 346

  Fly   286 IACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHLN 350
            |:|:|:|:...::|::::|||.|:..:.:.||.:..|||::.:::..| |..|.:.||.|:|.|:
pombe   347 ISCVEEGVVVPNSRIKINYGGDDITLLFMKLLMRSHFPYQDIDLKTPY-DWSLANALKIKYCGLS 410

  Fly   351 ASVCGAQEKHFNLRKHNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQ-DQYD 414
            .:....|...|..|..:....::|.:..||.::|||..|..::.....:....:|...|. |.||
pombe   411 EATYNVQLNSFFSRTPDKGTRKFTFKSLDETMLAPLGFFRPDIFENENKLHDRYTLFPVPVDVYD 475

  Fly   415 CEDCFDAEYLKETGRKNGVRGGDILQLSTSAGYQPRPQLPVT------ADDEE------LI---V 464
            .:. .:.|.|.:|         .:||:||          |::      .||||      |:   |
pombe   476 NQP-NNPESLAQT---------TLLQIST----------PISNIKANGKDDEEKKEESDLVTPSV 520

  Fly   465 VDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSI-----NRLSSYETKRKMF 524
            ..:...:..|.|....:.            ..:.|:.|||.||.|||     ..||. |..:.::
pombe   521 KFKPPRVVYCGSLAAPEI------------KNEKLIYPLDDAINQSIFSACDGNLSD-EKAKNLY 572

  Fly   525 GSILLVGSSAKLPGLAAWLEQRISQQVQSEVNVLI----KGMDAGMVAWKGAAIMSVLESARELW 585
            .|||:||.:.:.||.|..||:||..:..:...:.:    :.|||..||||||.|.:.:....|||
pombe   573 SSILIVGGAGQFPGFAHLLEERIHSKRANIPTISVIPPPRSMDAQFVAWKGACIYNRIRIVSELW 637

  Fly   586 ISQNDWQRHGLRVLRERS-PFLW 607
            |..:||:..|.|||:.:: .:.|
pombe   638 IKNSDWKMLGSRVLQYKTLGYFW 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 127/425 (30%)
arp8NP_593450.2 COG5277 91..656 CDD:227602 176/602 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 131 1.000 Domainoid score I1319
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11286
Inparanoid 1 1.050 221 1.000 Inparanoid score I904
OMA 1 1.010 - - QHG52058
OrthoFinder 1 1.000 - - FOG0005819
OrthoInspector 1 1.000 - - oto102000
orthoMCL 1 0.900 - - OOG6_104893
Panther 1 1.100 - - LDO PTHR11937
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R86
SonicParanoid 1 1.000 - - X4212
TreeFam 1 0.960 - -
1413.860

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