DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and arp1

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_596704.1 Gene:arp1 / 2539676 PomBaseID:SPBC1347.12 Length:379 Species:Schizosaccharomyces pombe


Alignment Length:445 Identity:87/445 - (19%)
Similarity:149/445 - (33%) Gaps:156/445 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 IHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGT----HCAVLV---VNDV 234
            |..||:||.:.           :...:|.||||...:      ::|.|    |..:|.   :.::
pombe    71 IQRPIERGIIQ-----------NWSDMEEIWSYIYSD------QQLNTLPEEHPLLLTEPPLANI 118

  Fly   235 YVRRHLREFV--TLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLD 297
            ..:..:.|:.  ||.:..|.|.     ...|.:.:.:....|.|::.|...|....|.||.|...
pombe   119 RNKEKIAEYFYETLNVPALSFS-----LQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPS 178

  Fly   298 ARVRLSYGGGDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHLNASVCGAQEKHFN 362
            |..:...||.|:...|.|.|||.|      :...|..:..::.|:|||.|::.:......|   :
pombe   179 AIQQEEIGGRDVTDYLQLQLRKSG------HELVSSAEKEIVREIKEKCCYVASDFRSEIE---S 234

  Fly   363 LRKHNGQWLRY------TIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDA 421
            ..:|..|...|      ||.:|.|...||..||:.|:                            
pombe   235 WTEHKPQIHTYQLPDNQTITLGTECFSAPEVLFNPEM---------------------------- 271

  Fly   422 EYLKETGRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQ 486
                                                                    :|::.:   
pombe   272 --------------------------------------------------------MGSEAS--- 277

  Fly   487 MNSNGCYHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQ-- 549
                       ||.:.|.::|:     ||..:.:..::.:|:|.|.|..|.|..   |:.||:  
pombe   278 -----------GLHIQLFKSIL-----LSDIDLRSTLYSNIVLSGGSTLLRGFG---ERFISELR 323

  Fly   550 QVQSEVN-VLIKGMDAGM-VAWKGAAIMSVLESARELWISQNDWQRHGLRVLRER 602
            .:..:.| |.|......| .||.|.:|::.|.:.|.|.|:..:::.....:.|.|
pombe   324 AISGKKNQVKIYASPERMHNAWLGGSILASLSTFRRLLITSEEYKNDQNVIFRRR 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 82/420 (20%)
arp1NP_596704.1 NBD_sugar-kinase_HSP70_actin 3..378 CDD:302596 86/443 (19%)
ACTIN 9..367 CDD:214592 85/432 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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