DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and Actg2

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_037025.1 Gene:Actg2 / 25365 RGDID:2027 Length:376 Species:Rattus norvegicus


Alignment Length:436 Identity:68/436 - (15%)
Similarity:151/436 - (34%) Gaps:139/436 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 IHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCAVLVVNDVYVRRHLR 241
            :.:||:.|           :..:...:|:||.::....|::...:   |..:|....:..:.:..
  Rat    68 LKYPIEHG-----------IITNWDDMEKIWHHSFYNELRVAPEE---HPTLLTEAPLNPKANRE 118

  Fly   242 EFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGG 306
            :...::.........::...:|.|.:.:|...|.|:|.|...|....|.:|.:...|.:||...|
  Rat   119 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAG 183

  Fly   307 GDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHL---------NASVCGAQEKHFN 362
            .||...|:.:|.:.|:.:      .:..:..::.::|||.|::         .|:...:.||.:.
  Rat   184 RDLTDYLMKILTERGYSF------VTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 242

  Fly   363 LRKHNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKET 427
            |  .:||    .|.:|:|....|..||                                      
  Rat   243 L--PDGQ----VITIGNERFRCPETLF-------------------------------------- 263

  Fly   428 GRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGC 492
                                ||                          |.:|.::||        
  Rat   264 --------------------QP--------------------------SFIGMESAG-------- 274

  Fly   493 YHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNV 557
                      :.:....||.: ...:.::.::.:.:|.|.:...||:|..:::.|:....|.:.:
  Rat   275 ----------IHETTYNSIMK-CDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKI 328

  Fly   558 -LIKGMDAGMVAWKGAAIMSVLESARELWISQNDWQRHGLRVLRER 602
             :|...:.....|.|.:|::.|.:.:::|||:.::...|..::..:
  Rat   329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRK 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 65/411 (16%)
Actg2NP_037025.1 PTZ00281 1..376 CDD:173506 68/436 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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