DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp8 and arp-11

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_501314.2 Gene:arp-11 / 183628 WormBaseID:WBGene00016793 Length:384 Species:Caenorhabditis elegans


Alignment Length:488 Identity:87/488 - (17%)
Similarity:164/488 - (33%) Gaps:185/488 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 WLDREAPVLFDDRILRLGAVDARNYDIHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERL 215
            ::|.|..::..|.:|.|                     :|.|  :...|.::.|.|    |.:.|
 Worm    20 YVDDEGKLITSDELLAL---------------------NNRK--TATKSTEYYEEI----LYKFL 57

  Fly   216 KIPLRKL--GTHCAVLVVNDVYVRRHLREFVT-LLLRRLGFRRCFLVQDSVASTFGAGIGYGCVV 277
            :|...|:  .|...|:.|..:::...||..:| :::.::..:....:...|.:||........||
 Worm    58 RIVFLKVLAPTDRPVIFVESIFMSESLRNTITKIVVEKIRCKSLMFMPSHVCATFPFNTQNALVV 122

  Fly   278 DIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDEL 342
            |||..:.....|.:|::.|                               |..||          
 Worm   123 DIGHSECIAVPIIEGVTML-------------------------------NEFES---------- 146

  Fly   343 KEKFCHLNASVCGAQ---------EKHFNLRKHNGQWLRYTIQVGDEALMAPLALFHTELLNITG 398
                   ..|:||.|         ||:..:.:.||:  |..|...|...:....|..|..|::. 
 Worm   147 -------ARSICGRQLERRVREQMEKYGQIAELNGE--RRAITENDWQDIDACKLIETLSLSLI- 201

  Fly   399 RTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELI 463
                               |.|.|..:...:......|:            :|.:          
 Worm   202 -------------------CLDKERAENWTKWEASEEGE------------KPDI---------- 225

  Fly   464 VVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLP--------------------LDQAII 508
                 ||:  |:.:|..             :||:..|:|                    .|.::.
 Worm   226 -----ETL--CKERLFP-------------NNGKIFVVPPVVFETSTEIFFNENLNPTSFDLSLP 270

  Fly   509 QSINRLSS---YETKRKMFGSILLVGSSAKLPGLAAWLEQR---ISQQVQSEVNVLIKGMDAG-- 565
            :.:::|.|   .:.::|:|.:|||.|..:.:|||...|||.   |.::..|::.|::|.....  
 Worm   271 KLLHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEI 335

  Fly   566 -----MVAWKGAAIM-SVLESARELWISQNDWQ 592
                 .|:|.||::: |:.|:.....::..:|:
 Worm   336 KNTPLFVSWLGASLLGSLRETIERKSLTLEEWK 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 79/437 (18%)
arp-11NP_501314.2 NBD_sugar-kinase_HSP70_actin 3..368 CDD:302596 86/486 (18%)
ACTIN 3..367 CDD:214592 86/485 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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