DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp8 and ACTRT2

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_536356.3 Gene:ACTRT2 / 140625 HGNCID:24026 Length:377 Species:Homo sapiens


Alignment Length:545 Identity:113/545 - (20%)
Similarity:183/545 - (33%) Gaps:183/545 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PGASDRPHHDPLLPPLDNVNS--NSGLMVEFEEQRLVVSRILQHCVVDNKNRLRVATPPQQLAHF 130
            |.|.|.|     ....||.:.  .:||..|| ..|.:||.|:.|.                    
Human     4 PHALDSP-----AVIFDNGSGFCKAGLSGEF-GPRHMVSSIVGHL-------------------- 42

  Fly   131 NRSSQAEKVPAPSGQMADEPWLDREAPVLFDDRILRLGAVDARNYDIHFPIQRGELNVHNEKGGS 195
                   |..|||.:...:.:...| ..|:....|:|          |.|.:||           
Human    43 -------KFQAPSAEANQKKYFVGE-EALYKQEALQL----------HSPFERG----------- 78

  Fly   196 LQASMQHLERIWSYALEERLKI-----PLRKLGTHCAVLVVNDVYVRRHLREFVTLLLRRLGFRR 255
            |......:||:|.:..|..|.:     ||  |.|.      ..:..|.:..:...::....|...
Human    79 LITGWDDVERLWKHLFEWELGVKPSDQPL--LATE------PSLNPRENREKMAEVMFENFGVPA 135

  Fly   256 CFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGGGDLDQVLLLLLRKC 320
            .:|...:|.:.:.:....|.|||.|...|....|.:|.|...|..:|...|.|:.::|:.||...
Human   136 FYLSDQAVLALYASACVTGLVVDSGDAVTCTVPIFEGYSLPHAVTKLHVAGRDITELLMQLLLAS 200

  Fly   321 G--FPYRECNVQESYVDAHLLDELKEKFCHLNASVCGAQEKHFNLRKHNGQWLRYTIQVGDEALM 383
            |  ||   |.     :|..|:|::|:|.|::      |.|....|.:...:.||           
Human   201 GHTFP---CQ-----LDKGLVDDIKKKLCYV------ALEPEKELSRRPEEVLR----------- 240

  Fly   384 APLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVRGGDILQLSTSAGYQ 448
                                        :|...|                  |:|:.|.     .
Human   241 ----------------------------EYKLPD------------------GNIISLG-----D 254

  Fly   449 PRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQGLVLPLDQAIIQSINR 513
            |..|.|      |.:.|.|         |||:|:.|                  |...:..||.:
Human   255 PLHQAP------EALFVPQ---------QLGSQSPG------------------LSNMVSSSITK 286

  Fly   514 LSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNVLIKG-MDAGMVAWKGAAIMSV 577
            ..: :.::.:||.|:|.|.:....||...|.:.:.|....:..:.|.. .|.....|.||:|::.
Human   287 CDT-DIQKILFGEIVLSGGTTLFHGLDDRLLKELEQLASKDTPIKITAPPDRWFSTWIGASIVTS 350

  Fly   578 LESARELWISQNDWQRHGLRVLRER 602
            |.|.:::|::..|::..|..|::.|
Human   351 LSSFKQMWVTAADFKEFGTSVVQRR 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 85/409 (21%)
ACTRT2NP_536356.3 ACTIN 10..377 CDD:214592 110/539 (20%)
NBD_sugar-kinase_HSP70_actin 11..377 CDD:302596 109/533 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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