DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp8 and Actl7b

DIOPT Version :9

Sequence 1:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_079547.2 Gene:Actl7b / 11471 MGIID:1343053 Length:418 Species:Mus musculus


Alignment Length:626 Identity:114/626 - (18%)
Similarity:192/626 - (30%) Gaps:267/626 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PAPPPIG-----------LPQPQA-------------QPLEAPKI--IVIHPGSQHLRIGRAADL 53
            |:|.|:|           ||.|:|             :|.:..||  :||..|||:.:.|.|.:.
Mouse     7 PSPKPMGTAQGDPGEAGTLPAPEAAGIRDTGSTQLKTKPKKIRKIKALVIDLGSQYCKCGYAGEP 71

  Fly    54 NPLTLLHA-VAYRRRPGASDRPHHDPLLPPLDNVNSNSGLMVEFEEQRLVVSRILQHCVVDNKNR 117
            .|...:.: |..|....|:|..         ||          |:|      ..:.|.:::.:..
Mouse    72 RPTYFISSTVGKRSAEMAADAG---------DN----------FKE------TYVGHELLNMEAS 111

  Fly   118 LRVATPPQQLAHFNRSSQAEKVPAPSGQMADEPWLDREAPVLFDDRILRLGAVDARNYDIHFPIQ 182
            |::..|   |.|              |.:.|  |                               
Mouse   112 LKLVNP---LKH--------------GVVVD--W------------------------------- 126

  Fly   183 RGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCAVLVVNDVYVRRHLRE-FVTL 246
                              ..::.||.|.....:||    :....||||.:........|| :..|
Mouse   127 ------------------DCIQNIWEYIFHTAMKI----MPEEHAVLVSDPPLSPTSNREKYAEL 169

  Fly   247 LLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDG--ISQLDARVRLSYGGGDL 309
            |....|.....:...::.|.:..|...|.||:.|...:.:..|.:|  :..|.:||  .|.|.||
Mouse   170 LFETFGIPAMHVTSQALLSIYSYGKTSGLVVESGHGVSHVVPISEGDLLPGLPSRV--DYAGCDL 232

  Fly   310 DQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHL-----NASVCGAQEKHFNLRKHNGQ 369
            ...|:.||.:.|..:.:.::       |:::.:|:|.|:.     .....|..|.|.:....:|:
Mouse   233 TNYLMQLLNEAGHKFSDDHL-------HIIEHIKKKCCYAALLPEEEMSLGLDELHVDYELPDGK 290

  Fly   370 WLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGRKNGVR 434
                .|.:|.|.......||...|:..|                                     
Mouse   291 ----IITIGQERFRCSEMLFKPSLVGCT------------------------------------- 314

  Fly   435 GGDILQLSTSAGYQP-RPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYHNGQG 498
                         || .|:|..|.             ::.||                    |.|
Mouse   315 -------------QPGLPELTATC-------------LARCQ--------------------GTG 333

  Fly   499 LVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNVLIKGMD 563
            .                    |.:|..::||.|....|.|        ..::.|.|:::|..| |
Mouse   334 F--------------------KEEMAANVLLCGGCTMLDG--------FPERFQRELSLLCPG-D 369

  Fly   564 AGMVA---------WKGAAIMSVLESARELWISQNDWQRHG 595
            :..||         |.|.:|::.|::.::||:|:.:::..|
Mouse   370 SPTVAAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERG 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 79/412 (19%)
Actl7bNP_079547.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 8/34 (24%)
ACTIN 52..418 CDD:214592 103/581 (18%)
NBD_sugar-kinase_HSP70_actin 53..418 CDD:302596 103/580 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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