DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4A and Ucp2

DIOPT Version :10

Sequence 1:NP_573246.1 Gene:Ucp4A / 32764 FlyBaseID:FBgn0030872 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_062227.2 Gene:Ucp2 / 54315 RGDID:3932 Length:309 Species:Rattus norvegicus


Alignment Length:307 Identity:111/307 - (36%)
Similarity:167/307 - (54%) Gaps:20/307 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VKFDYADSFACTYIVSVVAASIAELATYPLDLTKTRLQIQGEGAAHSAGKSNMQYRGMVATAFGI 96
            |||..|.:.||          ||:|.|:|||..|.|||||||....:...::.||||::.|...:
  Rat    15 VKFLGAGTAAC----------IADLITFPLDTAKVRLQIQGESQGLARTAASAQYRGVLGTILTM 69

  Fly    97 AREEGALKLWQGVTPALYRHVVYSGVRICSYDLMRKEFTQNGTQALPVWKSALCGVTAGAVAQWL 161
            .|.||...|:.|:...|.|.:.::.|||..||.: |:|...|::...:....|.|.|.||:|..:
  Rat    70 VRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSV-KQFYTKGSEHAGIGSRLLAGSTTGALAVAV 133

  Fly   162 ASPADLVKVQIQMEGRRRLMGEPPRVHSAGHAFRQIVQRGGIKGLWKGSIPNVQRAALVNLGDLT 226
            |.|.|:|||:.|.:.|   .|...|..|...|::.|.:..||:|||||:.|||.|.|:||..:|.
  Rat   134 AQPTDVVKVRFQAQAR---AGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCTELV 195

  Fly   227 TYDTIKHLIMNRLQMPDCHTVHVLASVCAGFVAAIMGTPADVVKTRIMNQPTDENGRGLLYRGSV 291
            |||.||..::....|.|....|..::..|||...::.:|.||||||.||....:      |..:.
  Rat   196 TYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ------YHSAG 254

  Fly   292 DCLRQTVSKEGFVALYKGFLPCWIRMAPWSLTFWLSFEQIRKMIGAS 338
            .|....:.|||..|.||||:|.::|:..|::..::::||:::.:.|:
  Rat   255 HCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAA 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4ANP_573246.1 Mito_carr 39..138 CDD:395101 36/98 (37%)
Mito_carr 142..239 CDD:395101 39/96 (41%)
Mito_carr 248..336 CDD:395101 28/87 (32%)
Ucp2NP_062227.2 Mito_carr 10..111 CDD:395101 40/106 (38%)
Solcar 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 11..106 39/101 (39%)
Important for interaction with long-chain fatty acids. /evidence=ECO:0000250|UniProtKB:P70406 16..63 24/56 (43%)
Mito_carr 112..206 CDD:395101 39/96 (41%)
Solcar 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 114..203 39/91 (43%)
Solcar 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 212..297 29/90 (32%)
Mito_carr 217..299 CDD:395101 28/87 (32%)
Important for interaction with long-chain fatty acids. /evidence=ECO:0000250|UniProtKB:P70406 278..285 2/6 (33%)

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