DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4A and rangrf

DIOPT Version :9

Sequence 1:NP_001188664.1 Gene:Ucp4A / 32764 FlyBaseID:FBgn0030872 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_002941865.3 Gene:rangrf / 496602 XenbaseID:XB-GENE-5760490 Length:238 Species:Xenopus tropicalis


Alignment Length:48 Identity:13/48 - (27%)
Similarity:21/48 - (43%) Gaps:8/48 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ASSTSSNPAPSSGRHQLRPVKFDYADSFACTYIVSVVAASIAELATYP 60
            |||..|..|..|..|.|      :|.:|:.  ::...:..::||...|
 Frog    43 ASSADSPMAQDSQPHPL------FAGAFSA--VLPPFSQDVSELREIP 82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4ANP_001188664.1 PTZ00169 39..335 CDD:240302 4/22 (18%)
Mito_carr 39..138 CDD:278578 4/22 (18%)
Mito_carr 142..239 CDD:278578
Mito_carr 248..336 CDD:278578
rangrfXP_002941865.3 Mog1 58..238 CDD:238137 6/33 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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