DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ucp4A and CG16736

DIOPT Version :10

Sequence 1:NP_573246.1 Gene:Ucp4A / 32764 FlyBaseID:FBgn0030872 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_649873.1 Gene:CG16736 / 41101 FlyBaseID:FBgn0037668 Length:277 Species:Drosophila melanogaster


Alignment Length:309 Identity:67/309 - (21%)
Similarity:118/309 - (38%) Gaps:69/309 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VSVVAASIAELATYPLDLTKTRLQIQGEGAAHSAGKSNMQYRGMVATAFGIAREEGALKLWQGVT 110
            |.::..:.|:|.::|::|  .|:.:|.....||....|..:|.|.        ..|....:.|:.
  Fly     5 VGLLIKTTAQLLSHPMEL--VRVNMQANVIHHSRLSINHMFRLMA--------RHGLPGFYYGIV 59

  Fly   111 PALYRHVVYSGVRICSYDLMRKEFTQNGTQAL---PVWKSALCGVTA--GAVAQWLASP------ 164
            .|..|..|::   :.:|.|...  .|:....|   |...|.:.|:|.  |.|   ||:|      
  Fly    60 AACLRCTVHT---MSTYTLFYN--LQDNKYVLMLQPYNTSMVLGITGFWGGV---LATPFAKLAV 116

  Fly   165 ---ADLVKVQIQMEGRRRLMGEPPRVHSAGHAFRQIVQRGGIKGLWKG-SIPNVQRAALVNLGDL 225
               |||.:...:....|...          ...:.:..:||...|:.| .|.::...|:..|   
  Fly   117 IRQADLTRGSYERRNYRNFW----------RGLKCMYAKGGFTYLFTGWKINSISSTAVAVL--- 168

  Fly   226 TTYDTIK---HLIM---NRLQMPDCHTVHVLASVCAGFVAAIMGTPADVVKTRIMNQPTDENGR- 283
              |..|.   |.::   :||..|....:..:|  ..|.:..::.||.|.:.|..:|: :...|| 
  Fly   169 --YTPISDKVHTVISWFHRLDEPWLSDLITMA--LTGSIITVIMTPVDALATLTLNE-SSHYGRT 228

  Fly   284 --GLLYRGSVDCLRQTVSKEGFVALYKGFLPCWIRMAPWSL--TFWLSF 328
              ..||       |:.:.|.|:...:.|:.|..:.:.|.::  ||...|
  Fly   229 SYPYLY-------RKIIRKHGYKGFFFGWKPALMALIPHTVLATFVYRF 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4ANP_573246.1 Mito_carr 39..138 CDD:395101 20/91 (22%)
Mito_carr 142..239 CDD:395101 24/117 (21%)
Mito_carr 248..336 CDD:395101 20/86 (23%)
CG16736NP_649873.1 Mito_carr 6..81 CDD:395101 18/89 (20%)
Mito_carr 187..277 CDD:395101 21/94 (22%)

Return to query results.
Submit another query.