DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4A and PMP34

DIOPT Version :10

Sequence 1:NP_573246.1 Gene:Ucp4A / 32764 FlyBaseID:FBgn0030872 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster


Alignment Length:340 Identity:71/340 - (20%)
Similarity:134/340 - (39%) Gaps:58/340 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 APSSGRHQLRPVKFDYADSFACTYIVSVVAASIAELAT-YPLDLTKTRLQIQGEGAAHSAGKSNM 84
            |||.....|....|.:|        ||..|.....::| ||||..::|||::..|...|.     
  Fly     3 APSKLSQVLSYQNFVHA--------VSGAAGGCIAMSTFYPLDTVRSRLQLEEAGDVRST----- 54

  Fly    85 QYRGMVATAFGIAREEGALKLWQGVTPALYRHVVYSGVRICSYDLMRKEFTQNGTQALPVWKSAL 149
              |.::..   |...||...|::|:.|.|....:.:.|...::..::...:..........|..|
  Fly    55 --RQVIKE---IVLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKAVASGGSPSQHSALKDLL 114

  Fly   150 CGVTAGAVAQWLASPADLVKVQIQMEGRRRLMGEPPRVHSAGH------AFRQIVQRGGIKGLWK 208
            .|..||.:.....:|..:|..:::|   |.:.|....|:.  |      ..:.:.::.||.|||.
  Fly   115 LGSIAGIINVLTTTPFWVVNTRLRM---RNVAGTSDEVNK--HYKNLLEGLKYVAEKEGIAGLWS 174

  Fly   209 GSIPN---VQRAALVNLGDLTTYDTIKHLIMNRLQMPDCHTVHVLASVCAGFVAAI-------MG 263
            |:||:   |...||    ....|:.:|..||.       .|...:.|:...|:.||       :.
  Fly   175 GTIPSLMLVSNPAL----QFMMYEMLKRNIMR-------FTGGEMGSLSFFFIGAIAKAFATVLT 228

  Fly   264 TPADVVKTRIMNQPTDENGRGLLYRGS-------VDCLRQTVSKEGFVALYKGFLPCWIRMAPWS 321
            .|..:|:|:..::..:.:.:.....||       ::.:...:..:|...|::|.....::....:
  Fly   229 YPLQLVQTKQRHRSKESDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTA 293

  Fly   322 LTFWLSFEQIRKMIG 336
            ...::::|:|...:|
  Fly   294 ALMFMAYEKIAGTVG 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4ANP_573246.1 Mito_carr 39..138 CDD:395101 22/99 (22%)
Mito_carr 142..239 CDD:395101 27/105 (26%)
Mito_carr 248..336 CDD:395101 14/101 (14%)
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 24/98 (24%)
Mito_carr 105..202 CDD:395101 26/105 (25%)
Mito_carr 214..303 CDD:395101 12/88 (14%)

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