DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4A and Ucp3

DIOPT Version :10

Sequence 1:NP_573246.1 Gene:Ucp4A / 32764 FlyBaseID:FBgn0030872 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_037299.1 Gene:Ucp3 / 25708 RGDID:3933 Length:308 Species:Rattus norvegicus


Alignment Length:304 Identity:110/304 - (36%)
Similarity:171/304 - (56%) Gaps:21/304 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VKFDYADSFACTYIVSVVAASIAELATYPLDLTKTRLQIQGEGAAHSAGKSNMQYRGMVATAFGI 96
            |||..|.:.||          .|:|.|:|||..|.|||||||    :.|..::||||::.|...:
  Rat    15 VKFLGAGTAAC----------FADLLTFPLDTAKVRLQIQGE----NPGVQSVQYRGVLGTILTM 65

  Fly    97 AREEGALKLWQGVTPALYRHVVYSGVRICSYDLMRKEFTQNGTQALPVWKSALCGVTAGAVAQWL 161
            .|.||....:.|:...|:|.:.::.:||..||.:::.:|..||....|....|.|.|.||:|...
  Rat    66 VRTEGPRSPYSGLVAGLHRQMSFASIRIGLYDSVKQFYTPKGTDHSSVAIRILAGCTTGAMAVTC 130

  Fly   162 ASPADLVKVQIQMEGRRRLMGEPPRVHSAGHAFRQIVQRGGIKGLWKGSIPNVQRAALVNLGDLT 226
            |.|.|:|||:.|...|....|| .:......|:|.|.:..|::|||||:.||:.|.|:||..::.
  Rat   131 AQPTDVVKVRFQAMIRLGTGGE-RKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMV 194

  Fly   227 TYDTIKHLIMNRLQMPDCHTVHVLASVCAGFVAAIMGTPADVVKTRIMNQPTDENGRGLLYRGSV 291
            |||.||..:::.....|....|.:::..|||.|.::.:|.||||||.||.|.   ||   ||..:
  Rat   195 TYDIIKEKLLDSHLFTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNAPP---GR---YRSPL 253

  Fly   292 DCLRQTVSKEGFVALYKGFLPCWIRMAPWSLTFWLSFEQIRKMI 335
            .|:.:.|::||..|.||||:|.::|:..|::..::::||:::.:
  Rat   254 HCMLRMVAQEGPTAFYKGFMPSFLRLGSWNVMMFVTYEQLKRAL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4ANP_573246.1 Mito_carr 39..138 CDD:395101 33/98 (34%)
Mito_carr 142..239 CDD:395101 37/96 (39%)
Mito_carr 248..336 CDD:395101 33/88 (38%)
Ucp3NP_037299.1 Mito_carr 10..107 CDD:395101 37/105 (35%)
Solcar 1 11..102 36/100 (36%)
Mito_carr 109..206 CDD:395101 37/97 (38%)
Solcar 2 111..202 37/91 (41%)
Mito_carr 209..299 CDD:395101 34/95 (36%)
Solcar 3 211..296 34/90 (38%)
Purine nucleotide binding. /evidence=ECO:0000250 275..297 4/21 (19%)

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