DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4A and Ucp3

DIOPT Version :9

Sequence 1:NP_001188664.1 Gene:Ucp4A / 32764 FlyBaseID:FBgn0030872 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_037299.1 Gene:Ucp3 / 25708 RGDID:3933 Length:308 Species:Rattus norvegicus


Alignment Length:304 Identity:110/304 - (36%)
Similarity:171/304 - (56%) Gaps:21/304 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VKFDYADSFACTYIVSVVAASIAELATYPLDLTKTRLQIQGEGAAHSAGKSNMQYRGMVATAFGI 96
            |||..|.:.||          .|:|.|:|||..|.|||||||    :.|..::||||::.|...:
  Rat    15 VKFLGAGTAAC----------FADLLTFPLDTAKVRLQIQGE----NPGVQSVQYRGVLGTILTM 65

  Fly    97 AREEGALKLWQGVTPALYRHVVYSGVRICSYDLMRKEFTQNGTQALPVWKSALCGVTAGAVAQWL 161
            .|.||....:.|:...|:|.:.::.:||..||.:::.:|..||....|....|.|.|.||:|...
  Rat    66 VRTEGPRSPYSGLVAGLHRQMSFASIRIGLYDSVKQFYTPKGTDHSSVAIRILAGCTTGAMAVTC 130

  Fly   162 ASPADLVKVQIQMEGRRRLMGEPPRVHSAGHAFRQIVQRGGIKGLWKGSIPNVQRAALVNLGDLT 226
            |.|.|:|||:.|...|....|| .:......|:|.|.:..|::|||||:.||:.|.|:||..::.
  Rat   131 AQPTDVVKVRFQAMIRLGTGGE-RKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMV 194

  Fly   227 TYDTIKHLIMNRLQMPDCHTVHVLASVCAGFVAAIMGTPADVVKTRIMNQPTDENGRGLLYRGSV 291
            |||.||..:::.....|....|.:::..|||.|.::.:|.||||||.||.|.   ||   ||..:
  Rat   195 TYDIIKEKLLDSHLFTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNAPP---GR---YRSPL 253

  Fly   292 DCLRQTVSKEGFVALYKGFLPCWIRMAPWSLTFWLSFEQIRKMI 335
            .|:.:.|::||..|.||||:|.::|:..|::..::::||:::.:
  Rat   254 HCMLRMVAQEGPTAFYKGFMPSFLRLGSWNVMMFVTYEQLKRAL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4ANP_001188664.1 PTZ00169 39..335 CDD:240302 106/295 (36%)
Mito_carr 39..138 CDD:278578 33/98 (34%)
Mito_carr 142..239 CDD:278578 37/96 (39%)
Mito_carr 248..336 CDD:278578 33/88 (38%)
Ucp3NP_037299.1 Mito_carr 10..107 CDD:278578 37/105 (35%)
Solcar 1 11..102 36/100 (36%)
PTZ00169 13..298 CDD:240302 110/304 (36%)
Mito_carr 109..206 CDD:278578 37/97 (38%)
Solcar 2 111..202 37/91 (41%)
Mito_carr 209..299 CDD:278578 34/95 (36%)
Solcar 3 211..296 34/90 (38%)
Purine nucleotide binding. /evidence=ECO:0000250 275..297 4/21 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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