DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4A and ucp-4

DIOPT Version :9

Sequence 1:NP_001188664.1 Gene:Ucp4A / 32764 FlyBaseID:FBgn0030872 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_505414.1 Gene:ucp-4 / 179315 WormBaseID:WBGene00006729 Length:324 Species:Caenorhabditis elegans


Alignment Length:340 Identity:152/340 - (44%)
Similarity:208/340 - (61%) Gaps:28/340 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AVASSTSSNPAPSSGRHQLRPVKFDYADSFACTYIVSVVAASIAELATYPLDLTKTRLQIQGEGA 75
            :..:|||.:.||.:.:         .....|..|.:|..||.:||..|||||:|||||||     
 Worm     3 SAVTSTSDSTAPGNSQ---------TFKKIATKYFLSCTAALVAETVTYPLDITKTRLQI----- 53

  Fly    76 AHSAGKSNMQYRGMVATAFGIAREEGALKLWQGVTPALYRHVVYSGVRICSYDLMR-KEFTQNGT 139
                .::.....|||...:.|.|.|||:.||.||.||:.||.:|:|:|:.:|:.:| ..|.:...
 Worm    54 ----ARNKFTKGGMVQVTYDIIRREGAMALWTGVAPAITRHYIYTGIRMGAYEQIRLLTFNKEVE 114

  Fly   140 QALPVWKSALCGVTAGAVAQWLASPADLVKVQIQMEGRRRLMGEPPRVHSAGHAFRQIVQRGGIK 204
            ::.|:|||.|||..:|.:||:.|||.||||||:||||.|||..:|.|...|...||.:.:..|..
 Worm   115 KSFPLWKSMLCGAFSGLIAQFAASPTDLVKVQMQMEGLRRLQKQPLRYTGATDCFRSLYRTQGFF 179

  Fly   205 GLWKGSIPNVQRAALVNLGDLTTYDTIKHLIMNRLQMPDCHTVHVLASVCAGFVAAIMGTPADVV 269
            |||.|.:||.|||||:|:.|:.|||::||.:::..::.|....|.:||.|||..|||:..|:|||
 Worm   180 GLWIGWMPNCQRAALLNMADIATYDSVKHGLIDNFELKDNWLTHAVASACAGLAAAIVSLPSDVV 244

  Fly   270 KTRIMNQPTDE---------NGRGLLYRGSVDCLRQTVSKEGFVALYKGFLPCWIRMAPWSLTFW 325
            |||:|:|...|         |....||:|.|||..:.:..|||.:|||||||.:|||||||||||
 Worm   245 KTRMMDQIRHELDAKMMHKKNTHVDLYKGVVDCYIKIIKNEGFFSLYKGFLPSYIRMAPWSLTFW 309

  Fly   326 LSFEQIRKMIGASGY 340
            :|:|:|||..|||.:
 Worm   310 VSYEEIRKWTGASSF 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4ANP_001188664.1 PTZ00169 39..335 CDD:240302 144/305 (47%)
Mito_carr 39..138 CDD:278578 41/99 (41%)
Mito_carr 142..239 CDD:278578 50/96 (52%)
Mito_carr 248..336 CDD:278578 52/96 (54%)
ucp-4NP_505414.1 PTZ00169 20..317 CDD:240302 142/305 (47%)
Mito_carr 22..111 CDD:278578 41/97 (42%)
Mito_carr 115..214 CDD:278578 50/98 (51%)
Mito_carr <240..318 CDD:278578 42/77 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166381
Domainoid 1 1.000 108 1.000 Domainoid score I4050
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12523
Inparanoid 1 1.050 288 1.000 Inparanoid score I1707
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59581
OrthoDB 1 1.010 - - D1013743at2759
OrthoFinder 1 1.000 - - FOG0004436
OrthoInspector 1 1.000 - - otm14299
orthoMCL 1 0.900 - - OOG6_105732
Panther 1 1.100 - - LDO PTHR45618
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3442
SonicParanoid 1 1.000 - - X3722
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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