Protein Alignment CG8142 and RfC38

DIOPT Version :9

• Sequence 1: NP_573245.1
• Gene: CG8142 / 32763
• FlyBaseID: FBgn0030871
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001285833.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Alignment Length: 350
• Identity: 93/350 - (26%)
• Similarity: 149/350 - (42%)
• Gaps: 57/350 - (16%)

  Fly    30 APWVEKYRPRNVDDVVEQSEVVAVLRKCVEGGDLPNMLLYGPPGTGKTSTILAASRQIFGD---- 90
            |.||:|||||.:..:....:....||...:..|.|:::.|||.|.||.:.|:...|:::|.
  Fly     2 ALWVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVER 66

  Fly    91 --------------------MFKDRILELNASDERGI---NVVRTKIKNFS---QLSASSVRPDG 129
                                :..:..||:|.|| .|:   .||...||..:   |:..|..|
  Fly    67 LRSETMTFTTPSNRKVEVMTVSSNYHLEVNPSD-AGMYDRTVVIDLIKQVAQTHQIEISGQR--- 127

  Fly   130 KPCPPFKIIILDEADSMTHAAQSALRRTMEKESRSTRFCLICNYVSRIIVPITSRCSKFRFKALG 194
                .||:|::.|.|.:|..||.||||||||...:.|..:..|..||||..|.|||...|..|..
  Fly   128 ----EFKVIVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPN 188

  Fly   195 EDKVIDRLKYICEMEGVKIEDDAYKSIVKISGGDLRRAITTLQSCYRLKGPEHIINTADLFEMSG 259
            |.:::..|:..|:.||:.:..:..|.:|..|..:||||:..|::....|.|         |..:.
  Fly   189 ETEIVSILQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAP---------FTANQ 244

  Fly   260 VIPEYYLEDYLEVCRS--------GNYERLEQFVREIGFSAYSVGQMMEQFVEFIVHHPGLNDPQ 316
            .||:...:.:|....|        ...|::.:.:.|:.........:....||.:|::..::  .
  Fly   245 EIPDLDWQVFLRETASQIISEQTPAKLEKIRERLYELLTQGVPPNLIFRGLVEQLVNNCDMS--I 307

  Fly   317 KATICDKLGECCFRLQDGGSEYLQI 341
            ||...:...|...|:|.|......:
  Fly   308 KAKTLEFATEYEHRMQSGAKHIFHL 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG8142	NP_573245.1	rfc	31..344	CDD:234763	92/348 (26%)
		AAA	45..187	CDD:99707	52/171 (30%)
		AAA_assoc_2	211..>256	CDD:292811	10/44 (23%)
		Rep_fac_C	<293..344	CDD:285713	9/48 (19%)
RfC38	NP_001285833.1	rfc	3..345	CDD:234763	92/348 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45455783
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	55	1.000	Inparanoid score	I449
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11669
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	6	5.900