Protein Alignment CG8142 and Rfc4

DIOPT Version :9

• Sequence 1: NP_573245.1
• Gene: CG8142 / 32763
• FlyBaseID: FBgn0030871
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001099339.1
• Gene: Rfc4 / 288003
• RGDID: 1310142
• Length: 364
• Species: Rattus norvegicus
• Alignment Length: 359
• Identity: 194/359 - (54%)
• Similarity: 251/359 - (69%)
• Gaps: 11/359 - (3%)

  Fly     1 MQAFLK-TGKSTAGSGDKSQGTPAA-------RRKPPAPWVEKYRPRNVDDVVEQSEVVAVLRKC 57
            |||||| |..||.....|.:|..::       ::..|.||||||||:.||:|..|.||||||:|.
  Rat     1 MQAFLKGTSVSTKPQLTKERGISSSAGSSGETKKVKPVPWVEKYRPKCVDEVAFQEEVVAVLKKS 65

  Fly    58 VEGGDLPNMLLYGPPGTGKTSTILAASRQIFG-DMFKDRILELNASDERGINVVRTKIKNFSQLS 121
            :||.||||:|.|||||||||||||||:|::|| ::|:.|:|||||||||||.|||.|:|||:||:
  Rat    66 LEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLT 130

  Fly   122 ASSVRPDGKPCPPFKIIILDEADSMTHAAQSALRRTMEKESRSTRFCLICNYVSRIIVPITSRCS 186
            .|..|.||||||||||:|||||||||.|||:||||||||||::||||||||||||||.|:|||||
  Rat   131 VSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCS 195

  Fly   187 KFRFKALGEDKVIDRLKYICEMEGVKIEDDAYKSIVKISGGDLRRAITTLQSCYRLKGPEHIINT 251
            |||||.|.:.....||..|.|.|.|||.|:....:|:||.||||:|||.|||..||.|.:.|...
  Rat   196 KFRFKPLSDKIQQKRLLDIAEKENVKIGDEEIAYLVRISEGDLRKAITFLQSATRLTGGKEISED 260

  Fly   252 ADLFEMSGVIPEYYLEDYLEVCRSGNYERLEQFVREIGFSAYSVGQMMEQFVEFIVHHPGLNDPQ 316
            . :.:::||||...:|..:..|.||::::||..::.:....::..|::.|..:.|:....|:|.|
  Rat   261 V-ITDIAGVIPAATIEGIVTACHSGSFDKLEAVLKNLIDEGHAATQLVNQLHDSIIEDENLSDKQ 324

  Fly   317 KATICDKLGECCFRLQDGGSEYLQIMDLGCCIIL 350
            |:.|.:||.|....|.||..|:||:|.| |..::
  Rat   325 KSIITEKLAEVDKCLADGADEHLQLMSL-CATVM 357

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG8142	NP_573245.1	rfc	31..344	CDD:234763	180/313 (58%)
		AAA	45..187	CDD:99707	108/142 (76%)
		AAA_assoc_2	211..>256	CDD:292811	21/44 (48%)
		Rep_fac_C	<293..344	CDD:285713	18/50 (36%)
Rfc4	NP_001099339.1	rfc	39..354	CDD:234763	181/316 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166354231
Domainoid	1	1.000	203	1.000	Domainoid score	I2883
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H6288
Inparanoid	1	1.050	357	1.000	Inparanoid score	I2159
OMA	1	1.010	-	-		QHG53599
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	1	1.000	-	-		FOG0000505
OrthoInspector	1	1.000	-	-		oto96519
orthoMCL	1	0.900	-	-		OOG6_101335
Panther	1	1.100	-	-	LDO	PTHR11669
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3510
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	16	15.770