Protein Alignment CG8142 and rfc3

DIOPT Version :9

• Sequence 1: NP_573245.1
• Gene: CG8142 / 32763
• FlyBaseID: FBgn0030871
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_958865.1
• Gene: rfc3 / 259256
• ZFINID: ZDB-GENE-020809-3
• Length: 356
• Species: Danio rerio
• Alignment Length: 326
• Identity: 94/326 - (28%)
• Similarity: 145/326 - (44%)
• Gaps: 56/326 - (17%)

  Fly    32 WVEKYRPRNVDDVVEQSEVVAVLRKCVEGGDLPNMLLYGPPGTGKTSTILAASRQIFG-DMFKDR 95
            ||:||||.::..:....|....|:..|:.||.|::|:|||.|.||.:.|:...|:::| .:.|.|
Zfish     4 WVDKYRPTSLAKLDYHKEQANQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELYGAGVEKLR 68

  Fly    96 I-----------------------LELNASDERGIN--VVRTKIKNFS---QLSASSVRPDGKPC 132
            |                       ||:|.||....:  |::..||..:   |:.:|:.|
Zfish    69 IEHQSITTPSKKKLEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQIQSSAQR------ 127

  Fly   133 PPFKIIILDEADSMTHAAQSALRRTMEKESRSTRFCLICNYVSRIIVPITSRCSKFRFKALGEDK 197
             .||:::|.|.|.:|..||.||||||||...:.|..|.||..|::|.||.|||...|......::
Zfish   128 -EFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIAPIRSRCLAVRVPLPSVEE 191

  Fly   198 VIDRLKYICEMEGVKIEDDAYKSIVKISGGDLRRAITTLQSCYRLKGPEHIINTADLFEMSGVIP 262
            |...|..:|..||:.:..:..|.|.:.||.:||:|:...::|...:.|         |.....||
Zfish   192 VCSVLSGVCRKEGLLLPPELAKQIAEKSGRNLRKALLMCEACRVQQYP---------FSPDQDIP 247

  Fly   263 EYYLEDYL-EVCRSGNYERLEQFVREIGFSAYSVGQMMEQFVEFIVHHPGLNDPQKATICDKLGE 326
            |...|.|| |...:...::..|.:.|:....|          |.:.|........|..:.:.|..
Zfish   248 ETDWEVYLRETANAIVSQQSPQRLLEVRARLY----------ELLTHCISPEVIMKGLVTELLSN 302

  Fly   327 C 327
            |
Zfish   303 C 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG8142	NP_573245.1	rfc	31..344	CDD:234763	94/326 (29%)
		AAA	45..187	CDD:99707	57/170 (34%)
		AAA_assoc_2	211..>256	CDD:292811	9/44 (20%)
		Rep_fac_C	<293..344	CDD:285713	6/35 (17%)
rfc3	NP_958865.1	rfc	3..345	CDD:234763	94/326 (29%)
		AAA	21..179	CDD:99707	55/164 (34%)
		Rep_fac_C	250..337	CDD:285713	12/64 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.920