DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8142 and Rfc2

DIOPT Version :10

Sequence 1:NP_573245.1 Gene:CG8142 / 32763 FlyBaseID:FBgn0030871 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_064406.1 Gene:Rfc2 / 19718 MGIID:1341868 Length:349 Species:Mus musculus


Alignment Length:329 Identity:122/329 - (37%)
Similarity:180/329 - (54%) Gaps:54/329 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PWVEKYRPRNVDDVVEQSEVVAVLRKCVEGGDLPNMLLYGPPGTGKTSTILAASRQIFGDMFKDR 95
            ||||||||..::::|...:.|:.|......|::||:::.||||||||::||..:|.:.|...||.
Mouse    32 PWVEKYRPLKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDA 96

  Fly    96 ILELNASDERGINVVRTKIKNFSQLSASSVRPDGKPCPPFKIIILDEADSMTHAAQSALRRTMEK 160
            :||||||::|||:|||.|||.|:|...:  .|.|:    .||||||||||||..||.|||||||.
Mouse    97 VLELNASNDRGIDVVRNKIKMFAQQKVT--LPKGR----HKIIILDEADSMTDGAQQALRRTMEI 155

  Fly   161 ESRSTRFCLICNYVSRIIVPITSRCSKFRFKALGEDKVIDRLKYICEMEGVKIEDDAYKSIVKIS 225
            .|::|||.|.||...:||.||.|||:..|:..|.:.:|:.||..:.|.|.|...||..::|:..:
Mouse   156 YSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLTRLMNVIEKEKVPYTDDGLEAIIFTA 220

  Fly   226 GGDLRRAITTLQSCYRLKGPEHIINTADLFEMS-------------------------------- 258
            .||:|:|:..|||.:...|   .||:.::|::.                                
Mouse   221 QGDMRQALNNLQSTFSGFG---YINSENVFKVCDEPHPLLVKEMIQHCVDANIDEAYKILAHLWH 282

  Fly   259 -GVIPEYYLEDYLEVCRS---GNYERLEQFVREIGFSAYSVGQMMEQFVEFIVHHPGLNDPQKAT 319
             |..||..:.:...||::   ..|.:|| |::|||::...|.:.:...::.    .||    .|.
Mouse   283 LGYSPEDVIGNIFRVCKTFPMAEYLKLE-FIKEIGYTHMKVAEGVNSLLQM----AGL----LAR 338

  Fly   320 ICDK 323
            :|.|
Mouse   339 LCQK 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8142NP_573245.1 rfc 31..344 CDD:234763 122/329 (37%)
Rfc2NP_064406.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
PLN03025 31..343 CDD:178596 122/329 (37%)
Blue background indicates that the domain is not in the aligned region.

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