Protein Alignment CG8142 and rfc-2

DIOPT Version :9

• Sequence 1: NP_573245.1
• Gene: CG8142 / 32763
• FlyBaseID: FBgn0030871
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_500069.1
• Gene: rfc-2 / 176946
• WormBaseID: WBGene00004338
• Length: 334
• Species: Caenorhabditis elegans
• Alignment Length: 336
• Identity: 116/336 - (34%)
• Similarity: 182/336 - (54%)
• Gaps: 48/336 - (14%)

  Fly    30 APWVEKYRPRNVDDVVEQSEVVAVLRKCVEGGDLPNMLLYGPPGTGKTSTILAASRQIFGDMFKD 94
            |||||||||:.:.|:|....:|..|:.....|::||::|.||||.|||:::.|.:|::.||..|:
 Worm    10 APWVEKYRPKVLADIVGNENIVERLKVIGHEGNVPNIVLSGPPGCGKTTSVWALARELLGDKVKE 74

  Fly    95 RILELNASDERGINVVRTKIKNFSQLSASSVRPDGKPCPPFKIIILDEADSMTHAAQSALRRTME 159
            .:|||||||||||:|||.:||.|:|...:  .|:|:    .||||||||||||..||.|||||||
 Worm    75 AVLELNASDERGIDVVRHRIKTFAQTKVT--LPEGR----HKIIILDEADSMTDGAQQALRRTME 133

  Fly   160 KESRSTRFCLICNYVSRIIVPITSRCSKFRFKALGEDKVIDRLKYICEMEGVKIEDDAYKSIVKI 224
            ..:::|||.|.||...:||.||.|||:..|:..|...:::.|:|.:.:.|.|..:|...::|:..
 Worm   134 MYTKTTRFALACNQSEKIIEPIQSRCALLRYTKLSPVQLLTRVKEVAKAEKVNYDDGGLEAILFT 198

  Fly   225 SGGDLRRAITTLQ---SCYRLKGPEHIINTAD------------------LFEMSGVIPEYYLED 268
            :.||:|:|:..||   :.|.|...|:::...|                  .||.|.:|.|::
 Worm   199 AQGDMRQALNNLQATVNAYELVNKENVLKVCDEPHPDLMIKMLHYCTDRKFFEASKIIHEFH--- 260

  Fly   269 YLEVCRSGNYERLEQFVREIGFSAYSVGQMMEQFVEFIVHHPGLNDPQKATICDKLGECCFRLQD 333
                              .:|||:..:...:.:.|:.:.....:::..:.....::..|..|:..
 Worm   261 ------------------RLGFSSDDIVSTLFRVVKTVELSKNVSEQLRMEYIRQIAMCHMRIVQ 307

  Fly   334 GGSEYLQIMDL 344
            |.:..||:..|
 Worm   308 GLTSKLQLSRL 318

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG8142	NP_573245.1	rfc	31..344	CDD:234763	114/333 (34%)
		AAA	45..187	CDD:99707	73/141 (52%)
		AAA_assoc_2	211..>256	CDD:292811	13/65 (20%)
		Rep_fac_C	<293..344	CDD:285713	6/50 (12%)
rfc-2	NP_500069.1	PLN03025	11..325	CDD:178596	115/335 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	1	1.000	-	-		FOG0000505
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.820