Protein Alignment CG8142 and rfc-4

DIOPT Version :9

• Sequence 1: NP_573245.1
• Gene: CG8142 / 32763
• FlyBaseID: FBgn0030871
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_498521.1
• Gene: rfc-4 / 175976
• WormBaseID: WBGene00004340
• Length: 334
• Species: Caenorhabditis elegans
• Alignment Length: 336
• Identity: 138/336 - (41%)
• Similarity: 192/336 - (57%)
• Gaps: 56/336 - (16%)

  Fly    25 RRKPPAPWVEKYRPRNVDDVVEQSEVVAVLRKCVEGGDLPNMLLYGPPGTGKTSTILAASRQIF- 88
            :|.....|.|||||:.:||:..|.|||.:|:..::|.|||::|.||||||||||..||..||:|
 Worm    10 KRPKVLTWTEKYRPKTLDDIAYQDEVVTMLKGALQGRDLPHLLFYGPPGTGKTSAALAFCRQLFP 74

  Fly    89 GDMFKDRILELNASDERGINVVRTKIKNFSQLS-ASSVRPDGKPCPPFKIIILDEADSMTHAAQS 152
            .::|.||:|:|||||||||.|||.||::||:.| ..|.|.|   ....|||||||.|:||..||:
 Worm    75 KNIFHDRVLDLNASDERGIAVVRQKIQSFSKSSLGHSHRED---VLKLKIIILDEVDAMTREAQA 136

  Fly   153 ALRRTMEKESRSTRFCLICNYVSRIIVPITSRCSKFRFKALGEDKVIDRLKYICEMEGVKIEDDA 217
            |:||.:|..|::|||.||||||||:|.|:.|||:|||||:|..:..:.||:.||:.||..:.||.
 Worm   137 AMRRVIEDFSKTTRFILICNYVSRLIPPVVSRCAKFRFKSLPAEIQVQRLRTICDAEGTPMSDDE 201

  Fly   218 YKSIVKISGGDLRRAITTLQS--------------CYRLKGPEHIINTADLFEMSGVIPEYYLED 268
            .|.:::.|.||||||:.||||              || |:|      ::|...:|
 Worm   202 LKQVMEYSEGDLRRAVCTLQSLAPILKSGDDNARNCY-LRG------SSDSLLIS---------- 249

  Fly   269 YLEVCRS---GNYERLEQFVREIGFSAYSVG-------QMMEQFVEFIVHHPGLNDPQKATICDK 323
              .||:|   .:..::....::|..|...|.       |:|::.|        :||.....:...
 Worm   250 --NVCKSILTADVPQIIALTKDITKSCTGVAFIRRCFQQLMDEDV--------INDENIGVMGKL 304

  Fly   324 LGECCFRLQDG 334
            :..|..|:.||
 Worm   305 VATCEKRILDG 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG8142	NP_573245.1	rfc	31..344	CDD:234763	137/330 (42%)
		AAA	45..187	CDD:99707	82/143 (57%)
		AAA_assoc_2	211..>256	CDD:292811	19/58 (33%)
		Rep_fac_C	<293..344	CDD:285713	10/49 (20%)
rfc-4	NP_498521.1	44	12..329	CDD:222866	137/334 (41%)
		AAA	32..169	CDD:99707	80/139 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160167658
Domainoid	1	1.000	138	1.000	Domainoid score	I3020
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	224	1.000	Inparanoid score	I2253
Isobase	1	0.950	-	0	Normalized mean entropy	S610
OMA	1	1.010	-	-		QHG53599
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	1	1.000	-	-		FOG0000505
OrthoInspector	1	1.000	-	-		oto17526
orthoMCL	1	0.900	-	-		OOG6_101335
Panther	1	1.100	-	-	LDO	PTHR11669
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1088
SonicParanoid	1	1.000	-	-		X3510
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	16	15.750