DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Taf9 and TAFII21

DIOPT Version :10

Sequence 1:NP_523391.3 Gene:Taf9 / 32762 FlyBaseID:FBgn0000617 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_175816.1 Gene:TAFII21 / 841854 AraportID:AT1G54140 Length:183 Species:Arabidopsis thaliana


Alignment Length:166 Identity:64/166 - (38%)
Similarity:95/166 - (57%) Gaps:7/166 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VPKDAQVIMSILKELNVQEYEPRVVNQLLEFTFRYVTCILDDAKVYANHARKKTIDLDDVRLATE 82
            ||:||:::.|:||.:.|::|||||::|.||..:|||..:|.||:||:.||.|..||.|||:||.:
plant     9 VPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVEVLTDAQVYSEHASKPNIDCDDVKLAIQ 73

  Fly    83 VTLDKSFTGPLERHVLAKVADVRNSMPLPPIKPHCGLRLPPDRYCLTGVNYKLRATNQPKKMTKS 147
            ..::.||:.|..|.||.::|..||.:|||......|:.|||::..|...||:|..   |||    
plant    74 SKVNFSFSQPPPREVLLELAASRNKIPLPKSIAGPGVPLPPEQDTLLSPNYQLVI---PKK---- 131

  Fly   148 AVEGRPLKTVVKPVSSANGPKRPHSVVAKQQVVTIP 183
            :|...|.:|......:..|.........:||...:|
plant   132 SVSTEPEETEDDEEMTDPGQSSQEQQQQQQQTSDLP 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf9NP_523391.3 TFIID-31kDa 16..136 CDD:460525 53/117 (45%)
TAFII21NP_175816.1 TFIID-31kDa 6..126 CDD:460525 53/116 (46%)

Return to query results.
Submit another query.